CpipJ_CPIJ001077 (Culex pipiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 CpipJ_CPIJ001077 T203663_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.673 0.465
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.673 0.465
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.673 0.465
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.615 0.326
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.615 0.326
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.615 0.326
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.615 0.326
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.615 0.326
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.615 0.326
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.615 0.326
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.615 0.326
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.615 0.326
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ001077-RA Homeodomain 250 292

Links

Other Homeodomain family TFs
Other Culex pipiens TFs

1146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014243 Ricinus communis 30170.m014243 N 0.000
AARA011457 Anopheles arabiensis AARA011457 I 0.867
ACUA001481 Anopheles culicifacies ACUA001481 I 0.816
ACYPI55918 Acyrthosiphon pisum ACYPI55918 I 0.797
AFAF013036 Anopheles farauti AFAF013036 I 0.000
AFAF020197 Anopheles farauti AFAF020197 I 0.000
AFUN008465 Anopheles funestus AFUN008465 I 0.833
Alligator_sinensis_CCG010661.1 Alligator sinensis Alligator_sinensis_CCG010661.1 I 0.662
ALUE_0001569401 Ascaris lumbricoides ALUE_0001569401 I 0.000
AMAM003654 Anopheles maculatus AMAM003654 I 0.766
AMEC008489 Anopheles melas AMEC008489 I 0.867
ANCDUO_12194 Ancylostoma duodenale ANCDUO_12194 I 0.709
AQUA005938 Anopheles quadriannulatus AQUA005938 I 0.000
ASIS009140 Anopheles sinensis ASIS009140 I 0.833
ASU_12993 Ascaris suum ASU_12993 I 0.676
BGIOSGA023284 Oryza indica BGIOSGA023284 N 0.000
BGLB004725 Biomphalaria glabrata BGLB004725 I 0.000
BRADI1G35790 Brachypodium distachyon BRADI1G35790 N 0.000
Brh_R005942 Buceros rhinoceros Brh_R005942 I 0.000
BTMF_0000212801 Brugia timori BTMF_0000212801 I 0.635
BZIP50 Oryza sativa OS06G0622700 N 0.000
Ca_20172 Cicer arietinum Ca_20172 N 0.000
CGI_10025343 Crassostrea gigas CGI_10025343 I 0.000
Cla023847 Citrullus lanatus Cla023847 N 0.000
CLEC013163 Cimex lectularius CLEC013163 I 0.860
Cmyd_10010796 Chelonia mydas Cmyd_10010796 I 0.621
Cmyd_10020021 Chelonia mydas Cmyd_10020021 I 0.000
CPIJ001077 Culex quinquefasciatus CPIJ001077 I 0.867
Cucsa.272470 Cucumis sativus Cucsa.272470 N 0.000
D918_09140 Trichuris suis D918_09140 I 0.000
DAPPUDRAFT_57557 Daphnia pulex DAPPUDRAFT_57557 I 0.608
DICVIV_11777 Dictyocaulus viviparus DICVIV_11777 I 0.618
DME_0000391201 Dracunculus medinensis DME_0000391201 I 0.675
ECANG7_04683 Echinococcus canadensis ECANG7_04683 I 0.666
EEL_0000283401 Elaeophora elaphi EEL_0000283401 I 0.613
EFV52646 Trichinella spiralis EFV52646 I 0.000
EmuJ_000791300 Echinococcus multilocularis EmuJ_000791300 I 0.666
ENSACAG00000005037 Anolis carolinensis ENSACAG00000005037 I 0.000
ENSAMEG00000008305 Ailuropoda melanoleuca ENSAMEG00000008305 I 0.000
ENSAMEG00000008592 Ailuropoda melanoleuca ENSAMEG00000008592 I 0.000
ENSAPLG00000007956 Anas platyrhynchos ENSAPLG00000007956 I 0.000
ENSBTAP00000004042-D1 Bos grunniens ENSBTAP00000004042-D1 I 0.000
ENSCSAG00000002361 Chlorocebus sabaeus ENSCSAG00000002361 I 0.000
ENSCSAG00000006059 Chlorocebus sabaeus ENSCSAG00000006059 I 0.000
ENSDNOG00000040223 Dasypus novemcinctus ENSDNOG00000040223 I 0.702
ENSETEG00000006944 Echinops telfairi ENSETEG00000006944 I 0.687
ENSFALG00000005291 Ficedula albicollis ENSFALG00000005291 I 0.000
ENSFALG00000007758 Ficedula albicollis ENSFALG00000007758 I 0.000
ENSGGOG00000013955 Gorilla gorilla ENSGGOG00000013955 I 0.000
ENSGMOG00000001730 Gadus morhua ENSGMOG00000001730 I 0.000
ENSGMOG00000002984 Gadus morhua ENSGMOG00000002984 I 0.000
ENSLACG00000004119 Latimeria chalumnae ENSLACG00000004119 I 0.000
ENSLACG00000018094 Latimeria chalumnae ENSLACG00000018094 I 0.000
ENSLOCG00000004960 Lepisosteus oculatus ENSLOCG00000004960 I 0.000
ENSLOCG00000008328 Lepisosteus oculatus ENSLOCG00000008328 I 0.000
ENSMEUG00000006658 Macropus eugenii ENSMEUG00000006658 I 0.000
ENSMICG00000002512 Microcebus murinus ENSMICG00000002512 I 0.719
ENSMMUG00000001577 Macaca mulatta ENSMMUG00000001577 I 0.000
ENSMMUG00000021668 Macaca mulatta ENSMMUG00000021668 I 0.000
ENSMMUP00000034710 Macaca fascicularis ENSMMUP00000034710 I 0.000
ENSMODG00000027538 Monodelphis domestica ENSMODG00000027538 I 0.000
ENSMPUG00000002688 Mustela putorius furo ENSMPUG00000002688 I 0.000
ENSMPUG00000015060 Mustela putorius furo ENSMPUG00000015060 I 0.000
ENSNLEG00000000189 Nomascus leucogenys ENSNLEG00000000189 I 0.000
ENSNLEG00000002343 Nomascus leucogenys ENSNLEG00000002343 I 0.000
ENSOANG00000014248 Ornithorhynchus anatinus ENSOANG00000014248 I 0.000
ENSOARG00000000046 Ovis aries ENSOARG00000000046 I 0.000
ENSOARG00000000124 Ovis aries ENSOARG00000000124 I 0.621
ENSONIG00000010444 Oreochromis niloticus ENSONIG00000010444 I 0.000
ENSP00000254457-D1 Bos grunniens ENSP00000254457-D1 I 0.000
ENSP00000261731 Macaca fascicularis ENSP00000261731 I 0.000
ENSPANG00000019666 Papio anubis ENSPANG00000019666 I 0.000
ENSPANG00000022127 Papio anubis ENSPANG00000022127 I 0.000
ENSPFOG00000016138 Poecilia formosa ENSPFOG00000016138 I 0.000
ENSPPYG00000004992 Pongo abelii ENSPPYG00000004992 I 0.000
ENSPPYG00000008214 Pongo abelii ENSPPYG00000008214 I 0.000
ENSPPYG00000020680 Pongo abelii ENSPPYG00000020680 I 0.642
ENSPSIG00000005953 Pelodiscus sinensis ENSPSIG00000005953 I 0.000
ENSPSIG00000008536 Pelodiscus sinensis ENSPSIG00000008536 I 0.760
ENSPSIG00000016729 Pelodiscus sinensis ENSPSIG00000016729 I 0.000
ENSSHAG00000010404 Sarcophilus harrisii ENSSHAG00000010404 I 0.000
ENSSTOG00000021620 Ictidomys tridecemlineatus ENSSTOG00000021620 I 0.000
ENSSTOG00000022593 Ictidomys tridecemlineatus ENSSTOG00000022593 I 0.000
ENSXMAG00000005342 Xiphophorus maculatus ENSXMAG00000005342 I 0.000
EVEC_0000238601 Enterobius vermicularis EVEC_0000238601 I 0.673
F775_26495 Aegilops tauschii F775_26495 N 0.000
F775_42313 Aegilops tauschii F775_42313 I 0.635
fgenesh2_pg.scaffold_205000001 Branchiostoma floridae fgenesh2_pg.scaffold_205000001 I 0.832
fgenesh2_pg.scaffold_5000049 Branchiostoma floridae fgenesh2_pg.scaffold_5000049 I 0.646
GLYMA02G19754 Glycine max GLYMA02G19754 N 0.000
Gorai.009G309200 Gossypium raimondii Gorai.009G309200 N 0.000
GPLIN_000644800 Globodera pallida GPLIN_000644800 I 0.636
GPLIN_001075500 Globodera pallida GPLIN_001075500 I 0.000
GPUH_0000844301 Gongylonema pulchrum GPUH_0000844301 I 0.615
GPUH_0001825501 Gongylonema pulchrum GPUH_0001825501 I 0.000
GRMZM2G025812 Zea mays GRMZM2G025812 N 0.000
GSMUA_Achr1G19750_001 Musa acuminata GSMUA_Achr1G19750_001 N 0.000
HDID_0000471501 Hymenolepis diminuta HDID_0000471501 I 0.638
HelroG67164 Helobdella robusta HelroG67164 I 0.000
HelroG67489 Helobdella robusta HelroG67489 I 0.000
HelroG70524 Helobdella robusta HelroG70524 I 0.000
HelroG92485 Helobdella robusta HelroG92485 I 0.653
HHAL002696-PA Halyomorpha halys HHAL002696-PA I 0.831
HMEL004647 Heliconius melpomene HMEL004647 I 0.816
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.719
HNAJ_0000718601 Hymenolepis nana HNAJ_0000718601 I 0.624
HOXC4 Echinops telfairi ENSETEG00000017258 I 0.653
Hsal_06667--XP_001121341.1_APIME Harpegnathos saltator Hsal_06667--XP_001121341.1_APIME I 0.697
ISCW002094 Ixodes scapularis ISCW002094 I 0.862
KLTH0F00242g Lachancea thermotolerans KLTH0F00242g I 0.000
KLTH0F00242g Kluyveromyces thermotolerans KLTH0F00242g I 0.000
L798_02155 Zootermopsis nevadensis L798_02155 I 0.811
LCUP012257 Lucilia cuprina LCUP012257 I 0.862
LCUP013886 Lucilia cuprina LCUP013886 I 0.680
LDEC001243 Leptinotarsa decemlineata LDEC001243 I 0.727
LHX1 Anolis carolinensis ENSACAG00000002508 I 0.000
LHX1 Bos taurus ENSBTAG00000033562 I 0.000
LHX1 Canis familiaris ENSCAFG00000017853 I 0.000
LHX1 Callithrix jacchus ENSCJAG00000015458 I 0.000
LHX1 Cavia porcellus ENSCPOG00000027154 I 0.000
LHX1 Dasypus novemcinctus ENSDNOG00000036189 I 0.000
Lhx1 Dipodomys ordii ENSDORG00000006956 I 0.000
LHX1 Equus caballus ENSECAG00000001597 I 0.000
LHX1 Erinaceus europaeus ENSEEUG00000002834 I 0.000
LHX1 Echinops telfairi ENSETEG00000003513 I 0.000
LHX1 Felis catus ENSFCAG00000005089 I 0.000
LHX1 Homo sapiens ENSG00000273706 D 0.000
LHX1 Gallus gallus ENSGALG00000005409 I 0.000
LHX1 Gorilla gorilla ENSGGOG00000002703 I 0.000
LHX1 Loxodonta africana ENSLAFG00000006400 I 0.000
LHX1 Myotis lucifugus ENSMLUG00000014749 I 0.000
Lhx1 Mus musculus ENSMUSG00000018698 D 0.000
LHX1 Oryctolagus cuniculus ENSOCUG00000024664 I 0.000
LHX1 Otolemur garnettii ENSOGAG00000013789 I 0.000
LHX1 Procavia capensis ENSPCAG00000006272 I 0.000
LHX1 Pan troglodytes ENSPTRG00000009050 I 0.000
LHX1 Pteropus vampyrus ENSPVAG00000015637 I 0.000
Lhx1 Rattus norvegicus ENSRNOG00000002812 I 0.000
LHX1 Sus scrofa ENSSSCG00000017692 I 0.000
LHX1 Tursiops truncatus ENSTTRG00000008900 I 0.000
lhx1 Xenopus tropicalis XB-GENE-482482 I 0.000
lhx1.L Xenopus laevis XB-GENE-856460 I 0.000
lhx1a Danio rerio ENSDARG00000014018 I 0.000
lhx1a Gasterosteus aculeatus ENSGACG00000013605 I 0.000
lhx1a Tetraodon nigroviridis ENSTNIG00000014399 I 0.000
lhx1a Takifugu rubripes ENSTRUG00000000174 I 0.000
lhx1b Danio rerio ENSDARG00000007944 I 0.000
LHX5 Bos taurus ENSBTAG00000003107 I 0.000
LHX5 Canis familiaris ENSCAFG00000009121 I 0.000
LHX5 Callithrix jacchus ENSCJAG00000009813 I 0.000
LHX5 Dasypus novemcinctus ENSDNOG00000010448 I 0.000
Lhx5 Dipodomys ordii ENSDORG00000002125 I 0.000
LHX5 Equus caballus ENSECAG00000016915 I 0.000
LHX5 Echinops telfairi ENSETEG00000006405 I 0.000
LHX5 Homo sapiens ENSG00000089116 D 0.000
Lhx5 Gallus gallus ENSGALG00000008303 I 0.000
LHX5 Gorilla gorilla ENSGGOG00000010583 I 0.000
LHX5 Loxodonta africana ENSLAFG00000015121 I 0.000
Lhx5 Mus musculus ENSMUSG00000029595 D 0.000
LHX5 Oryctolagus cuniculus ENSOCUG00000009321 I 0.000
LHX5 Otolemur garnettii ENSOGAG00000003519 I 0.000
LHX5 Procavia capensis ENSPCAG00000010694 I 0.000
LHX5 Pan troglodytes ENSPTRG00000005493 I 0.000
Lhx5 Rattus norvegicus ENSRNOG00000001392 I 0.000
LHX5 Sus scrofa ENSSSCG00000009869 I 0.000
LHX5 Tupaia belangeri ENSTBEG00000003770 I 0.000
lhx5 Xenopus tropicalis XB-GENE-490400 I 0.000
lhx5.S Xenopus laevis XB-GENE-865965 I 0.000
lmx1a Danio rerio ENSDARG00000020354 I 0.675
LOAG_14821 Loa loa LOAG_14821 I 0.607
LPERR06G17810 Leersia perrieri LPERR06G17810 N 0.000
Lus10040069.g Linum usitatissimum Lus10040069.g N 0.000
MCINX003994 Melitaea cinxia MCINX003994 I 0.725
MESCA000156 Megaselia scalaris MESCA000156 I 0.811
Minc09570 Meloidogyne incognita Minc09570 I 0.709
MLOC_22013 Hordeum vulgare MLOC_22013 N 0.000
MTR_1g050502 Medicago truncatula MTR_1g050502 N 0.000
Myotis_brandtii_LHX1_10031028 Myotis brandtii Myotis_brandtii_LHX1_10031028 I 0.000
nAv.1.0.1.g02632 Acanthocheilonema viteae nAv.1.0.1.g02632 I 0.648
NBR_0000086401 Nippostrongylus brasiliensis NBR_0000086401 I 0.635
nDi.2.2.2.g12576 Dirofilaria immitis nDi.2.2.2.g12576 I 0.676
nOo.2.0.1.g02038 Onchocerca ochengi nOo.2.0.1.g02038 I 0.857
nRc.2.0.1.g25699 Romanomermis culicivorax nRc.2.0.1.g25699 I 0.719
OB06G29280 Oryza brachyantha OB06G29280 N 0.000
OBART06G21250 Oryza barthii OBART06G21250 N 0.000
OESDEN_23981 Oesophagostomum dentatum OESDEN_23981 I 0.000
OFLC_0001553801 Onchocerca flexuosa OFLC_0001553801 I 0.607
OGLUM06G22450 Oryza glumaepatula OGLUM06G22450 N 0.000
OMERI01G31300 Oryza meridionalis OMERI01G31300 N 0.000
ONIVA06G25200 Oryza nivara ONIVA06G25200 N 0.000
OPUNC06G19380 Oryza punctata OPUNC06G19380 N 0.000
ORUFI06G22890 Oryza rufipogon ORUFI06G22890 N 0.000
Pavir.Da00593 Panicum virgatum Pavir.Da00593 N 0.000
pax6a Danio rerio ENSDARG00000103379 I 0.692
PEQ_0000511901 Parascaris equorum PEQ_0000511901 I 0.803
PGSC0003DMG400010008 Solanum tuberosum PGSC0003DMG400010008 N 0.000
PISMIDRAFT_174060 Pisolithus microcarpus PISMIDRAFT_174060 I 0.610
Ppa-dsc-1 Pristionchus pacificus PPA18697 I 0.618
Pvit_13537 Pogona vitticeps Pvit_13537 I 0.000
Pvit_16426 Pogona vitticeps Pvit_16426 I 0.000
RPRC003712 Rhodnius prolixus RPRC003712 I 0.829
Sakowv30042332m.g Saccoglossus kowalevskii Sakowv30042332m.g I 0.000
Sb04g006400 Sorghum bicolor Sb04g006400 N 0.000
Sb10g024430 Sorghum bicolor Sb10g024430 N 0.000
SBAD_0000661201 Soboliphyme baturini SBAD_0000661201 I 0.666
scaffold33-EXSNAP2012.21 Pristionchus exspectatus scaffold33-EXSNAP2012.21 I 0.618
SCUD_0001059601 Schistosoma curassoni SCUD_0001059601 I 0.000
SCUD_0002251201 Schistosoma curassoni SCUD_0002251201 I 0.662
SCUD_0002260901 Schistosoma curassoni SCUD_0002260901 I 0.688
Si006978m.g Setaria italica Si006978m.g N 0.000
Si017847m.g Setaria italica Si017847m.g N 0.000
SINV17239 Solenopsis invicta SINV17239 I 0.614
Sjc_0024500 Schistosoma japonicum Sjc_0024500 I 0.690
SMAR007885 Strigamia maritima SMAR007885 I 0.000
SMRZ_0001120301 Schistosoma margrebowiei SMRZ_0001120301 I 0.000
SMTD_0002114601 Schistosoma mattheei SMTD_0002114601 I 0.000
SMTD_0002181901 Schistosoma mattheei SMTD_0002181901 I 0.688
SNAPOd2T00015974001 Oikopleura dioica SNAPOd2T00015974001 I 0.703
SNAPOd2T00015976001 Oikopleura dioica SNAPOd2T00015976001 I 0.698
Solyc04g082890.2 Solanum lycopersicum Solyc04g082890.2 N 0.000
SPER_0003668801 Spirometra erinaceieuropaei SPER_0003668801 I 0.735
SPU_006991 Strongylocentrotus purpuratus SPU_006991 I 0.000
SVUK_0001528201 Strongylus vulgaris SVUK_0001528201 I 0.621
TASK_0000693901 Taenia asiatica TASK_0000693901 I 0.624
TASK_0001023301 Taenia asiatica TASK_0001023301 I 0.700
TCNE_0000805901 Toxocara canis TCNE_0000805901 I 0.670
TMUE_s0059000100 Trichuris muris TMUE_s0059000100 I 0.000
Traes_7AL_25850F96F Triticum aestivum Traes_7AL_25850F96F N 0.000
Traes_7DL_3CE000E38 Triticum aestivum Traes_7DL_3CE000E38 N 0.000
TRE_0001706901 Trichobilharzia regenti TRE_0001706901 I 0.662
TRIUR3_33804 Triticum urartu TRIUR3_33804 N 0.000
TTAC_0000586501 Hydatigera taeniaeformis TTAC_0000586501 I 0.653
TTAC_0001116101 Hydatigera taeniaeformis TTAC_0001116101 I 0.624
YQE_01261 Dendroctonus ponderosae YQE_01261 I 0.000