ACYPI000853 (Acyrthosiphon pisum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ACYPI000853 T204124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.965
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.965
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.965
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.965
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.947
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.947
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.947
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.947
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.947
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.947
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.930
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI000853-PA Homeodomain 173 229

Links

Other Homeodomain family TFs
Other Acyrthosiphon pisum TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003560 Aedes aegypti AAEL003560 I
ACEP23758 Atta cephalotes ACEP23758 I
ACYPI008866 Acyrthosiphon pisum ACYPI008866 I
Cflo_06086--XP_393686.2_APIME Camponotus floridanus Cflo_06086--XP_393686.2_APIME I
CPIJ002221 Culex quinquefasciatus CPIJ002221 I
CPIJ019261 Culex quinquefasciatus CPIJ019261 I
CpipJ_CPIJ002221 Culex pipiens CpipJ_CPIJ002221 I
CpipJ_CPIJ019261 Culex pipiens CpipJ_CPIJ019261 I
GD13969 Drosophila simulans FBgn0185665 I
GE21576 Drosophila yakuba FBgn0238831 I
GG14388 Drosophila erecta FBgn0106647 I
GH15364 Drosophila grimshawi FBgn0122836 I
GI12964 Drosophila mojavensis FBgn0135721 I
GJ13109 Drosophila virilis FBgn0200336 I
GM14797 Drosophila sechellia FBgn0169718 I
HMEL011784 Heliconius melpomene HMEL011784 I
Hsal_03104--XP_393686.2_APIME Harpegnathos saltator Hsal_03104--XP_393686.2_APIME I
KGM_16865 Danaus plexippus KGM_16865 I
SGF3_BOMMO Bombyx mori SGF3_BOMMO D
SINV16010 Solenopsis invicta SINV16010 I
vvl Drosophila melanogaster FBgn0086680 D