CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bm7931
(
Brugia malayi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bm7931
T204816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.707
0.521
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.707
0.521
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.707
0.521
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.707
0.521
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.707
0.521
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.707
0.521
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.707
0.521
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.707
0.521
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.707
0.521
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.657
0.417
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.657
0.417
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.657
0.417
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bm7931z
Homeodomain
102
151
RRHRTTFTQEQLAELDAAFQKSHYPDIYVREELARITKLNEARIQVKIFF
Links
Other
Homeodomain
family TFs
Other
Brugia malayi
TFs
1152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUA_4G12690
Aspergillus fumigatus
CADAFUAG00008411
N
0.000
AOL_s00080g93
Arthrobotrys oligospora
AOL_s00080g93
N
0.000
fgenesh1_pm.00009_#_438
Aspergillus carbonarius
fgenesh1_pm.00009_#_438
N
0.000
fgeneshMC_pg.10_#_17
Mucor circinelloides
fgeneshMC_pg.10_#_17
N
0.000
fgeneshMC_pg.3_#_217
Mucor circinelloides
fgeneshMC_pg.3_#_217
N
0.000
GLOINDRAFT_222340
Rhizophagus irregularis
GLOINDRAFT_222340
N
0.000
RO3G_04327
Rhizopus oryzae
RO3G_04327
N
0.000