Bra013076 (Brassica rapa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bra013076 T205088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.826 0.696
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.565
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.618 0.435
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.618 0.435
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.618 0.435
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.618 0.435
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013076.1-P Homeodomain 289 337

Links

Other Homeodomain family TFs
Other Brassica rapa TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PMAA_095820 Talaromyces marneffei PMAA_095820 N 0.000
PMAA_095820 Penicillium marneffei PMAA_095820 N 0.000
TSTA_000600 Talaromyces stipitatus TSTA_000600 N 0.000
TSTA_002980 Talaromyces stipitatus TSTA_002980 N 0.000
TSTA_003830 Talaromyces stipitatus TSTA_003830 N 0.000
TSTA_008380 Talaromyces stipitatus TSTA_008380 N 0.000
TSTA_009130 Talaromyces stipitatus TSTA_009130 N 0.000
TSTA_009440 Talaromyces stipitatus TSTA_009440 N 0.000
TSTA_009900 Talaromyces stipitatus TSTA_009900 N 0.000
TSTA_022990 Talaromyces stipitatus TSTA_022990 N 0.000
TSTA_024630 Talaromyces stipitatus TSTA_024630 N 0.000
TSTA_025810 Talaromyces stipitatus TSTA_025810 N 0.000
TSTA_029420 Talaromyces stipitatus TSTA_029420 N 0.000
TSTA_035660 Talaromyces stipitatus TSTA_035660 N 0.000
TSTA_035730 Talaromyces stipitatus TSTA_035730 N 0.000
TSTA_050400 Talaromyces stipitatus TSTA_050400 N 0.000
TSTA_050560 Talaromyces stipitatus TSTA_050560 N 0.000
TSTA_052640 Talaromyces stipitatus TSTA_052640 N 0.000
TSTA_055970 Talaromyces stipitatus TSTA_055970 N 0.000
TSTA_059480 Talaromyces stipitatus TSTA_059480 N 0.000
TSTA_059810 Talaromyces stipitatus TSTA_059810 N 0.000
TSTA_069180 Talaromyces stipitatus TSTA_069180 N 0.000
TSTA_080510 Talaromyces stipitatus TSTA_080510 N 0.000
TSTA_086330 Talaromyces stipitatus TSTA_086330 N 0.000
TSTA_093940 Talaromyces stipitatus TSTA_093940 N 0.000
TSTA_096630 Talaromyces stipitatus TSTA_096630 N 0.000
TSTA_097820 Talaromyces stipitatus TSTA_097820 N 0.000
TSTA_097920 Talaromyces stipitatus TSTA_097920 N 0.000
TSTA_098800 Talaromyces stipitatus TSTA_098800 N 0.000
TSTA_106120 Talaromyces stipitatus TSTA_106120 N 0.000
TSTA_107220 Talaromyces stipitatus TSTA_107220 N 0.000
TSTA_112760 Talaromyces stipitatus TSTA_112760 N 0.000
TSTA_125380 Talaromyces stipitatus TSTA_125380 N 0.000
TSTA_125400 Talaromyces stipitatus TSTA_125400 N 0.000