CC1G_02962 (Coprinopsis cinerea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CC1G_02962 T205758_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.756 0.565
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.713 0.565
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.713 0.565
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.713 0.565
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.713 0.565
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.668 0.457
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.664 0.500
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.664 0.478
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.629 0.457
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.613 0.457
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAU85939 Homeodomain 620 668

Links

Other Homeodomain family TFs
Other Coprinopsis cinerea TFs

1082 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pag1_scaffold_64-snap-gene-0.36 Pythium aphanidermatum maker-pag1_scaffold_64-snap-gene-0.36 N 0.000
maker-par_contig_10149-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_10149-snap-gene-0.0 N 0.000
maker-par_contig_572-fgenesh-gene-0.5 Pythium arrhenomanes maker-par_contig_572-fgenesh-gene-0.5 N 0.000
maker-pve_contig_397-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_397-fgenesh-gene-0.0 N 0.000
Phyra85498 Phytophthora ramorum Phyra85498 N 0.000
Physo138283 Phytophthora sojae Physo138283 N 0.000
PYU1_G002992 Pythium ultimum PYU1_G002992 N 0.000