CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CNG03450
(
Cryptococcus neoformans
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CNG03450
T206020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CNG03450
M02066_2.00
Cryptococcus neoformans
NTTAATWDN
NHWATTAAN
PBM
Weirauch et al.(2014)
pTH5724
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02066_2.00
Homeodomain
1
56
KSPRKRTNDVQLAMLSDVFQRTQYPSTEERDELARQLGMTSRSVQIWFQNRRRAVK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAW44722
Homeodomain
316
371
KSPRKRTNDVQLAMLSDVFQRTQYPSTEERDELARQLGMTSRSVQIWFQNRRRAVK
Links
Other
Homeodomain
family TFs
Other
Cryptococcus neoformans
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184983.g13
Trametes cinnabarina
BN946_scf184983.g13
I
0.644
fgeneshTM_pg.2_#_419
Tremella mesenterica
fgeneshTM_pg.2_#_419
I
0.772
FIBRA_03525
Fibroporia radiculosa
FIBRA_03525
I
0.642
FOMPIDRAFT_1031831
Fomitopsis pinicola
FOMPIDRAFT_1031831
I
0.642
GLOINDRAFT_346743
Rhizophagus irregularis
GLOINDRAFT_346743
I
0.624
GLOTRDRAFT_127900
Gloeophyllum trabeum
GLOTRDRAFT_127900
I
0.643
gw1.10.371.1
Mucor circinelloides
gw1.10.371.1
I
0.658
gw1.16.189.1
Phycomyces blakesleeanus
gw1.16.189.1
I
0.657
gw1.26.106.1
Phycomyces blakesleeanus
gw1.26.106.1
I
0.623
gw1.6.914.1
Mucor circinelloides
gw1.6.914.1
I
0.623
K443DRAFT_105165
Laccaria amethystina
K443DRAFT_105165
I
0.609
L804_03528
Cryptococcus gattii
L804_03528
I
0.861
PHACADRAFT_258345
Phanerochaete carnosa
PHACADRAFT_258345
I
0.644
PHLGIDRAFT_184498
Phlebiopsis gigantea
PHLGIDRAFT_184498
I
0.644
RO3G_01863
Rhizopus oryzae
RO3G_01863
I
0.602
RO3G_04480
Rhizopus oryzae
RO3G_04480
I
0.658
RO3G_14851
Rhizopus oryzae
RO3G_14851
I
0.646
RO3G_16317
Rhizopus oryzae
RO3G_16317
I
0.672
SCHCODRAFT_257652
Schizophyllum commune
SCHCODRAFT_257652
I
0.654
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
0.601
SPPG_06166
Spizellomyces punctatus
SPPG_06166
I
0.603