CPIJ008039 (Culex quinquefasciatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CPIJ008039 T206126_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.867 1.000
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.867 1.000
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.867 1.000
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.867 1.000
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.867 1.000
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.822 0.947
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.822 0.947
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.822 0.947
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.822 0.947
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.822 0.947
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.822 0.947
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.822 0.947
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.822 0.947
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.822 0.947
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.822 0.947
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.822 0.947
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.822 0.947
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.822 0.947
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.822 0.947
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.822 0.947
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.822 0.947
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.822 0.947
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.822 0.930
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.820 0.947
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.770 0.895
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.770 0.895
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.646 0.544
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.632 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ008039-PA Homeodomain 151 210

Links

Other Homeodomain family TFs
Other Culex quinquefasciatus TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_119147 Agaricus bisporus AGABI2DRAFT_119147 N
BN946_scf184938.g39 Trametes cinnabarina BN946_scf184938.g39 N
CC1G_08430 Coprinopsis cinerea CC1G_08430 N
CERSUDRAFT_81545 Ceriporiopsis subvermispora CERSUDRAFT_81545 N
CY34DRAFT_803498 Suillus luteus CY34DRAFT_803498 N
DICSQDRAFT_39682 Dichomitus squalens DICSQDRAFT_39682 N
fgenesh1_pg.C_scaffold_3000005 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000005 N
FIBRA_08804 Fibroporia radiculosa FIBRA_08804 N
FOMPIDRAFT_1029945 Fomitopsis pinicola FOMPIDRAFT_1029945 N
GALMADRAFT_148160 Galerina marginata GALMADRAFT_148160 N
GLOTRDRAFT_121103 Gloeophyllum trabeum GLOTRDRAFT_121103 N
GYMLUDRAFT_48883 Gymnopus luxurians GYMLUDRAFT_48883 N
GYMLUDRAFT_87175 Gymnopus luxurians GYMLUDRAFT_87175 N
HYDPIDRAFT_101365 Hydnomerulius pinastri HYDPIDRAFT_101365 N
JAAARDRAFT_199965 Jaapia argillacea JAAARDRAFT_199965 N
LACBIDRAFT_295375 Laccaria bicolor LACBIDRAFT_295375 N
M378DRAFT_188501 Amanita muscaria M378DRAFT_188501 N
M404DRAFT_145615 Pisolithus tinctorius M404DRAFT_145615 N
Moror_8689 Moniliophthora roreri Moror_8689 N
Moror_8690 Moniliophthora roreri Moror_8690 N
PAXINDRAFT_83451 Paxillus involutus PAXINDRAFT_83451 N
PAXRUDRAFT_9762 Paxillus rubicundulus PAXRUDRAFT_9762 N
PHACADRAFT_166850 Phanerochaete carnosa PHACADRAFT_166850 N
PHLGIDRAFT_297873 Phlebiopsis gigantea PHLGIDRAFT_297873 N
PILCRDRAFT_814348 Piloderma croceum PILCRDRAFT_814348 N
PISMIDRAFT_111995 Pisolithus microcarpus PISMIDRAFT_111995 N
PISMIDRAFT_12751 Pisolithus microcarpus PISMIDRAFT_12751 N
PLEOSDRAFT_168592 Pleurotus ostreatus PLEOSDRAFT_168592 N
SCHCODRAFT_256706 Schizophyllum commune SCHCODRAFT_256706 N
SCLCIDRAFT_25025 Scleroderma citrinum SCLCIDRAFT_25025 N
SERLA73DRAFT_187538 Serpula lacrymans SERLA73DRAFT_187538 N