CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMEG00000004942
(
Ailuropoda melanoleuca
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSAMEG00000004942
T206864_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.720
0.333
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.720
0.333
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.720
0.333
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.720
0.333
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.664
0.467
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMEP00000005226
Homeodomain
142
169
KRARTAYTSAQLVELEKEFHFNRYLCRQ
ENSAMEP00000005226
Homeodomain
167
183
CRQIKIWFQNRRMKYKK
Links
Other
Homeodomain
family TFs
Other
Ailuropoda melanoleuca
TFs
142 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R006569
Calypte anna
Aan_R006569
N
0.000
Afo_R014584
Aptenodytes forsteri
Afo_R014584
N
0.000
Alligator_sinensis_CCG014093.1
Alligator sinensis
Alligator_sinensis_CCG014093.1
N
0.000
ASCL3
Sus scrofa
ENSSSCG00000014572
N
0.000
ASCL3
Loxodonta africana
ENSLAFG00000010672
N
0.000
ASCL3
Myotis lucifugus
ENSMLUG00000014718
N
0.000
ASCL3
Macaca mulatta
ENSMMUG00000001997
N
0.000
ASCL3
Monodelphis domestica
ENSMODG00000024589
N
0.000
Ascl3
Mus musculus
ENSMUSG00000035951
N
0.000
ASCL3
Sorex araneus
ENSSARG00000005318
N
0.000
ASCL3
Ornithorhynchus anatinus
ENSOANG00000003112
N
0.000
ASCL3
Pteropus vampyrus
ENSPVAG00000000414
N
0.000
ASCL3
Oryctolagus cuniculus
ENSOCUG00000011310
N
0.000
ASCL3
Otolemur garnettii
ENSOGAG00000014012
N
0.000
ASCL3
Ochotona princeps
ENSOPRG00000004802
N
0.000
ASCL3
Pan troglodytes
ENSPTRG00000003339
N
0.000
ASCL3
Procavia capensis
ENSPCAG00000014597
N
0.000
ASCL3
Meleagris gallopavo
ENSMGAG00000006388
N
0.000
ASCL3
Tupaia belangeri
ENSTBEG00000004929
N
0.000
ASCL3
Taeniopygia guttata
ENSTGUG00000008324
N
0.000
ASCL3
Homo sapiens
ENSG00000176009
N
0.000
ASCL3
Felis catus
ENSFCAG00000008414
N
0.000
ASCL3
Equus caballus
ENSECAG00000008707
N
0.000
ASCL3
Cavia porcellus
ENSCPOG00000011108
N
0.000
ASCL3
Callithrix jacchus
ENSCJAG00000011693
N
0.000
ASCL3
Canis familiaris
ENSCAFG00000024403
N
0.000
ASCL3
Bos taurus
ENSBTAG00000032339
N
0.000
ASCL3
Anolis carolinensis
ENSACAG00000009879
N
0.000
Brh_R010606
Buceros rhinoceros
Brh_R010606
N
0.000
Cmyd_10014495
Chelonia mydas
Cmyd_10014495
N
0.000
ENSAMEG00000019915
Ailuropoda melanoleuca
ENSAMEG00000019915
N
0.000
ENSAPLG00000001043
Anas platyrhynchos
ENSAPLG00000001043
N
0.000
ENSCSAG00000019329
Chlorocebus sabaeus
ENSCSAG00000019329
N
0.000
ENSCSAVG00000009227
Ciona savignyi
ENSCSAVG00000009227
N
0.000
ENSDORG00000013306
Dipodomys ordii
ENSDORG00000013306
N
0.000
ENSFALG00000014620
Ficedula albicollis
ENSFALG00000014620
N
0.000
ENSLACG00000017099
Latimeria chalumnae
ENSLACG00000017099
N
0.000
ENSMEUG00000016296
Macropus eugenii
ENSMEUG00000016296
N
0.000
ENSMICG00000005296
Microcebus murinus
ENSMICG00000005296
N
0.000
ENSNLEG00000017548
Nomascus leucogenys
ENSNLEG00000017548
N
0.000
ENSOARG00000017152
Ovis aries
ENSOARG00000017152
N
0.000
ENSP00000318846
Macaca fascicularis
ENSP00000318846
N
0.000
ENSP00000318846-D1
Bos grunniens
ENSP00000318846-D1
N
0.000
ENSPANG00000002749
Papio anubis
ENSPANG00000002749
N
0.000
ENSPMAG00000008115
Petromyzon marinus
ENSPMAG00000008115
N
0.000
ENSPPYG00000003501
Pongo abelii
ENSPPYG00000003501
N
0.000
ENSSHAG00000018108
Sarcophilus harrisii
ENSSHAG00000018108
N
0.000
ENSSTOG00000002499
Ictidomys tridecemlineatus
ENSSTOG00000002499
N
0.000
ENSTSYG00000006425
Tarsius syrichta
ENSTSYG00000006425
N
0.000
Gfo_R011835
Geospiza fortis
Gfo_R011835
N
0.000
Myotis_brandtii_ASCL3_10026847
Myotis brandtii
Myotis_brandtii_ASCL3_10026847
N
0.000
Ogr18889
Ophisaurus gracilis
Ogr18889
N
0.000
Pvit_03791
Pogona vitticeps
Pvit_03791
N
0.000
Tal_R007401
Tyto alba
Tal_R007401
N
0.000