CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DRGX
(
Choloepus hoffmanni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCHOG00000007456
T207777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.726
0.556
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.726
0.556
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.726
0.556
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.726
0.556
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.726
0.556
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.726
0.556
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.726
0.556
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.726
0.556
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.726
0.556
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.653
0.378
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.653
0.378
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.653
0.378
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000006599
Homeodomain
32
79
KQRRNPTIFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQX
Links
Other
Homeodomain
family TFs
Other
Choloepus hoffmanni
TFs
1072 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_189243
Agaricus bisporus
AGABI2DRAFT_189243
I
0.000
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.000
CC1G_13761
Coprinopsis cinerea
CC1G_13761
I
0.000
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.000
CY34DRAFT_41572
Suillus luteus
CY34DRAFT_41572
I
0.000
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.000
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.000
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.000
JAAARDRAFT_112445
Jaapia argillacea
JAAARDRAFT_112445
I
0.000
K443DRAFT_132577
Laccaria amethystina
K443DRAFT_132577
I
0.000
LACBIDRAFT_301563
Laccaria bicolor
LACBIDRAFT_301563
I
0.000
M378DRAFT_213370
Amanita muscaria
M378DRAFT_213370
I
0.000
M404DRAFT_57116
Pisolithus tinctorius
M404DRAFT_57116
I
0.000
PISMIDRAFT_58693
Pisolithus microcarpus
PISMIDRAFT_58693
I
0.000
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.000
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.000
SCLCIDRAFT_1207253
Scleroderma citrinum
SCLCIDRAFT_1207253
I
0.000
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.000