PBX3 (Echinops telfairi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSETEG00000012611 T209391_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX3
M08132_2.00
Homo sapiens
NNNTGAGTGACAGSNNN

NNNSCTGTCACTCANNN
ChIP-seq
Mathelier et al.(2014)
MA1114.1
0.666 0.295
PBX3
M07971_2.00
Homo sapiens
NNBDRCCAATSRVVD

HBBYSATTGGYHVNN
ChIP-seq
Gerstein et al.(2012)
GM12878_PBX3_HudsonAlpha
0.666 0.295
PBX3
M09155_2.00
Homo sapiens
DGABKGRCRGB

VCYGYCMVTCH
Misc
Kulakovskiy et al.(2013)
PBX3_HUMAN.H11MO.0.A
0.666 0.295
PBX3
M09560_2.00
Homo sapiens
NTGABTGACAGB

VCTGTCAVTCAN
Misc
Heinz et al.(2010)
GM12878-PBX3_GSE32465
0.666 0.295
PBX3
M10732_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_02
0.666 0.295
PBX3
M10733_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_03
0.666 0.295
PBX3
M10734_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_04
0.666 0.295
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000010220 Homeodomain 169 217
ENSETEP00000010220 Homeodomain 231 246

Links

Other Homeodomain family TFs
Other Echinops telfairi TFs

Invalid Input OrderBy

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action