CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFCAG00000026758
(
Felis catus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSFCAG00000026758
T209729_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.769
0.522
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.769
0.522
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.769
0.522
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.769
0.522
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.769
0.522
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.769
0.522
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.769
0.522
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.769
0.522
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.769
0.522
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.720
0.413
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.720
0.413
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.720
0.413
PITX2
M00313_2.00
Homo sapiens
NWAAKHYN
NRDMTTWN
PBM
Barrera et al.(2016)
PITX2_REF
0.377
1.000
Pitx3
M00428_2.00
Mus musculus
NTAAKCYN
NRGMTTAN
PBM
Berger et al.(2008)
Pitx3_3497
0.377
1.000
Pitx2
M00440_2.00
Mus musculus
NTAATCCN
NGGATTAN
PBM
Berger et al.(2008)
Pitx2_2274
0.377
1.000
PITX3
M03111_2.00
Homo sapiens
NHTAATCCN
NGGATTADN
SELEX
Jolma et al.(2013)
PITX3_1
0.377
1.000
PITX2
M05229_2.00
Homo sapiens
NTAAKCCN
NGGMTTAN
SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX
0.377
1.000
PITX2
M05231_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX
0.377
1.000
PITX3
M04997_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX
0.377
1.000
PITX2
M10720_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q2
0.377
1.000
PITX2
M10721_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q4
0.377
1.000
PITX2
M10722_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q6
0.377
1.000
PITX3
M10660_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q2
0.377
1.000
PITX3
M10661_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3_01
0.377
1.000
PITX3
M10662_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3
0.377
1.000
PITX2
M00314_2.00
Homo sapiens
NTAATMYN
NRKATTAN
PBM
Barrera et al.(2016)
PITX2_T114P
0.377
1.000
PITX2
M05230_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX
0.377
1.000
PITX2
M05232_2.00
Homo sapiens
YTAATCCY
RGGATTAR
SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX
0.377
1.000
PITX3
M04998_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX
0.377
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000024317
Homeodomain
63
108
RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV
Links
Other
Homeodomain
family TFs
Other
Felis catus
TFs
1228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_13802
Ancylostoma caninum
ANCCAN_13802
N
0.000
ANCDUO_07508
Ancylostoma duodenale
ANCDUO_07508
N
0.000
GPLIN_000910900
Globodera pallida
GPLIN_000910900
N
0.000
MCOS_0000726801
Mesocestoides corti
MCOS_0000726801
N
0.000
snap_masked-nMf.1.1.scaf00901-processed-gene-0.5
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00901-processed-gene-0.5
N
0.000
SSLN_0000489501
Schistocephalus solidus
SSLN_0000489501
N
0.000
TELCIR_23243
Teladorsagia circumcincta
TELCIR_23243
N
0.000