irx6a (Gasterosteus aculeatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGACG00000016678 T210148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.808 0.860
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.808 0.860
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.808 0.860
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.808 0.860
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.808 0.860
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.808 0.860
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.800 0.825
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.800 0.825
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.800 0.825
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.800 0.825
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.800 0.825
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.800 0.825
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.789 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.777 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000022021 Homeodomain 79 138
ENSGACP00000022022 Homeodomain 144 203

Links

Other Homeodomain family TFs
Other Gasterosteus aculeatus TFs

380 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_73079 Botryobasidium botryosum BOTBODRAFT_73079 N
BOTBODRAFT_76690 Botryobasidium botryosum BOTBODRAFT_76690 N
CY34DRAFT_51775 Suillus luteus CY34DRAFT_51775 N
DACRYDRAFT_52998 Dacryopinax sp DACRYDRAFT_52998 N
DICSQDRAFT_31039 Dichomitus squalens DICSQDRAFT_31039 N
FOMPIDRAFT_1091714 Fomitopsis pinicola FOMPIDRAFT_1091714 N
GYMLUDRAFT_107672 Gymnopus luxurians GYMLUDRAFT_107672 N
HETIRDRAFT_248182 Heterobasidion irregulare HETIRDRAFT_248182 N
HYDPIDRAFT_46608 Hydnomerulius pinastri HYDPIDRAFT_46608 N
JAAARDRAFT_132180 Jaapia argillacea JAAARDRAFT_132180 N
M404DRAFT_88423 Pisolithus tinctorius M404DRAFT_88423 N
M413DRAFT_71958 Hebeloma cylindrosporum M413DRAFT_71958 N
M422DRAFT_119565 Sphaerobolus stellatus M422DRAFT_119565 N
MPER_04209 Moniliophthora perniciosa MPER_04209 N
PHACADRAFT_172347 Phanerochaete carnosa PHACADRAFT_172347 N
PILCRDRAFT_57008 Piloderma croceum PILCRDRAFT_57008 N
PILCRDRAFT_82466 Piloderma croceum PILCRDRAFT_82466 N
PISMIDRAFT_80466 Pisolithus microcarpus PISMIDRAFT_80466 N
PLEOSDRAFT_1026938 Pleurotus ostreatus PLEOSDRAFT_1026938 N
SERLA73DRAFT_50420 Serpula lacrymans SERLA73DRAFT_50420 N