SIX3 (Macaca mulatta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMMUG00000014824 T211965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 1.000
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 1.000
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 1.000
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.982
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.982
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.982
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000019464 Homeodomain 169 225

Links

Other Homeodomain family TFs
Other Macaca mulatta TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013348 Calypte anna Aan_R013348 N
Afo_R001247 Aptenodytes forsteri Afo_R001247 N
Afo_R010197 Aptenodytes forsteri Afo_R010197 N
CLEC011940 Cimex lectularius CLEC011940 N
ENSACAG00000006940 Anolis carolinensis ENSACAG00000006940 N
ENSGALG00000026237 Gallus gallus ENSGALG00000026237 N
ENSOCUG00000000219 Oryctolagus cuniculus ENSOCUG00000000219 N
ENSSARG00000013900 Sorex araneus ENSSARG00000013900 N
ENSTBEG00000012996 Tupaia belangeri ENSTBEG00000012996 N
ENSVPAG00000008994 Vicugna pacos ENSVPAG00000008994 N
Gfo_R005435 Geospiza fortis Gfo_R005435 N
HelroG92919 Helobdella robusta HelroG92919 N
Ocbimv22035422m.g Octopus bimaculoides Ocbimv22035422m.g N
RPRC013047 Rhodnius prolixus RPRC013047 N
Tal_R007774 Tyto alba Tal_R007774 N
ZIC1 Myotis lucifugus ENSMLUG00000003411 N
ZIC1 Ochotona princeps ENSOPRG00000011909 N
Zic2 Dipodomys ordii ENSDORG00000012707 N
ZIC2 Ochotona princeps ENSOPRG00000007553 N
ZIC3 Tursiops truncatus ENSTTRG00000003415 N
zic3 Takifugu rubripes ENSTRUG00000006671 N
ZIC4 Macaca mulatta ENSMMUG00000004741 I
ZIC4 Homo sapiens ENSG00000174963 D
ZIC4 Echinops telfairi ENSETEG00000003182 N