CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOANG00000007689
(
Ornithorhynchus anatinus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSOANG00000007689
T212842_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOXB13
M02092_2.00
Homo sapiens
NTTWAYDDNN
NNHHRTWAAN
PBM
Weirauch et al.(2014)
pTH5808
0.859
0.947
Hoxb13
M00505_2.00
Mus musculus
NTTWAYDDNN
NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb13_3479
0.859
0.947
HOXB13
M03175_2.00
Homo sapiens
DTTTTATKGG
CCMATAAAAH
SELEX
Jolma et al.(2013)
HOXB13_1
0.859
0.947
HOXB13
M03176_2.00
Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV
SELEX
Jolma et al.(2013)
HOXB13_2
0.859
0.947
HOXB13
M05201_2.00
Homo sapiens
DTTTTATKGGN
NCCMATAAAAH
SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_1
0.859
0.947
HOXB13
M05202_2.00
Homo sapiens
NCTCGTAAAHH
DDTTTACGAGN
SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_2
0.859
0.947
HOXB13
M09149_2.00
Homo sapiens
TTTTATDRSN
NSYHATAAAA
Misc
Kulakovskiy et al.(2013)
HXB13_HUMAN.H11MO.0.A
0.859
0.947
HOXB13
M05203_2.00
Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN
SELEX
Yin et al.(2017)
HOXB13_eDBD_Methyl-HT-SELEX
0.859
0.947
Hoxc13
M00389_2.00
Mus musculus
NTTWAYDRNN
NNYHRTWAAN
PBM
Berger et al.(2008)
Hoxc13_3127
0.705
0.807
HOXC13
M03129_2.00
Homo sapiens
NTTTTATTRS
SYAATAAAAN
SELEX
Jolma et al.(2013)
HOXC13_1
0.705
0.807
HOXC13
M03130_2.00
Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN
SELEX
Jolma et al.(2013)
HOXC13_2
0.705
0.807
HOXC13
M05072_2.00
Homo sapiens
RKTTTATKGSN
NSCMATAAAMY
SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1
0.705
0.807
HOXC13
M05073_2.00
Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV
SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2
0.705
0.807
HOXC13
M10680_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC13_Q2
0.705
0.807
HOXC13
M05074_2.00
Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV
SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX
0.705
0.807
Hoxa13
M00473_2.00
Mus musculus
NTTWAYDRN
NYHRTWAAN
PBM
Berger et al.(2008)
Hoxa13_3126
0.701
0.807
HOXA13
M03098_2.00
Homo sapiens
DKTTTATKRS
SYMATAAAMH
SELEX
Jolma et al.(2013)
HOXA13_1
0.701
0.807
HOXA13
M03099_2.00
Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN
SELEX
Jolma et al.(2013)
HOXA13_2
0.701
0.807
HOXA13
M03100_2.00
Homo sapiens
DKTTTATKRS
SYMATAAAMH
SELEX
Jolma et al.(2013)
HOXA13_3
0.701
0.807
HOXA13
M03101_2.00
Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN
SELEX
Jolma et al.(2013)
HOXA13_4
0.701
0.807
HOXA13
M04977_2.00
Homo sapiens
DTTTTATKGGB
VCCMATAAAAH
SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1
0.701
0.807
HOXA13
M04978_2.00
Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2
0.701
0.807
HOXA13
M04981_2.00
Homo sapiens
DTTTTATKRSN
NSYMATAAAAH
SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1
0.701
0.807
HOXA13
M04982_2.00
Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2
0.701
0.807
HOXA13
M09134_2.00
Homo sapiens
VDTWTWATKGS
SCMATWAWAHB
Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C
0.701
0.807
Hoxa13
M09202_2.00
Mus musculus
VDTWTWATKGS
SCMATWAWAHB
Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C
0.701
0.807
HOXA13
M10653_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA13_01
0.701
0.807
HOXA13
M10654_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA13_02
0.701
0.807
HOXA13
M04979_2.00
Homo sapiens
DTTTTATTRSN
NSYAATAAAAH
SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1
0.701
0.807
HOXA13
M04980_2.00
Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2
0.701
0.807
HOXA13
M04983_2.00
Homo sapiens
DKTTTATTGBN
NVCAATAAAMH
SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1
0.701
0.807
HOXA13
M04984_2.00
Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2
0.701
0.807
HOXD13
M00299_2.00
Homo sapiens
NTTWAYDDN
NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_REF
0.696
0.772
Hoxd13
M00394_2.00
Mus musculus
NWTHRYDDN
NHHRYDAWN
PBM
Berger et al.(2008)
Hoxd13_2356
0.696
0.772
HOXD13
M03141_2.00
Homo sapiens
DTTTTATKRS
SYMATAAAAH
SELEX
Jolma et al.(2013)
HOXD13_1
0.696
0.772
HOXD13
M03142_2.00
Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV
SELEX
Jolma et al.(2013)
HOXD13_2
0.696
0.772
Hoxd13
M03247_2.00
Mus musculus
DKTTTATTRS
SYAATAAAMH
SELEX
Jolma et al.(2013)
Hoxd13_1
0.696
0.772
Hoxd13
M03248_2.00
Mus musculus
DDTTTAYKAGN
NCTMRTAAAHH
SELEX
Jolma et al.(2013)
Hoxd13_2
0.696
0.772
HOXD13
M05122_2.00
Homo sapiens
GKTTTATKGSS
SSCMATAAAMC
SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1
0.696
0.772
HOXD13
M05123_2.00
Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV
SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2
0.696
0.772
HOXD13
M10689_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD13_Q6
0.696
0.772
HOXD13
M00295_2.00
Homo sapiens
NTTWAYDDN
NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_N298S
0.696
0.772
HOXD13
M05124_2.00
Homo sapiens
DDTTTATTRBB
VVYAATAAAHH
SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1
0.696
0.772
HOXD13
M05125_2.00
Homo sapiens
VCTCGTAAAAH
DTTTTACGAGB
SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2
0.696
0.772
HOXD13
M00300_2.00
Homo sapiens
WTTTATDR
YHATAAAW
PBM
Barrera et al.(2016)
HOXD13_S316C
0.696
0.754
HOXD13
M00293_2.00
Homo sapiens
NTTWAYDDNN
NNHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_I297V
0.696
0.754
HOXD13
M00298_2.00
Homo sapiens
NTTWAYDDN
NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_R306W
0.689
0.754
hoxd13a
M02081_2.00
Danio rerio
WTTTATDR
YHATAAAW
PBM
Weirauch et al.(2014)
pTH6143
0.682
0.702
HOXD13
M00294_2.00
Homo sapiens
THGTWAAW
WTTWACDA
PBM
Barrera et al.(2016)
HOXD13_I322L
0.679
0.754
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000012251
Homeodomain
15
71
RKKRIPYSKAQLRELEREFAASKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK
Links
Other
Homeodomain
family TFs
Other
Ornithorhynchus anatinus
TFs
262 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000402
Anopheles albimanus
AALB000402
I
Aan_R005227
Calypte anna
Aan_R005227
I
ACUA017601
Anopheles culicifacies
ACUA017601
I
ACUA022001
Anopheles culicifacies
ACUA022001
I
ADAC002355
Anopheles darlingi
ADAC002355
I
AEPI001857
Anopheles epiroticus
AEPI001857
I
Afo_R003117
Aptenodytes forsteri
Afo_R003117
I
AFUN010580
Anopheles funestus
AFUN010580
I
Alligator_sinensis_CCG012577.1
Alligator sinensis
Alligator_sinensis_CCG012577.1
I
ALUE_0002104001
Ascaris lumbricoides
ALUE_0002104001
I
AMIN001006
Anopheles minimus
AMIN001006
I
ASIM_0002076001
Anisakis simplex
ASIM_0002076001
I
ASU_08570
Ascaris suum
ASU_08570
I
BGIBMGA010481
Bombyx mori
BGIBMGA010481
I
Bm5383
Brugia malayi
Bm5383
I
Brh_R009512
Buceros rhinoceros
Brh_R009512
I
CGI_10014747
Crassostrea gigas
CGI_10014747
I
CLEC006591
Cimex lectularius
CLEC006591
I
CPIJ000420
Culex quinquefasciatus
CPIJ000420
I
CpipJ_CPIJ000420
Culex pipiens
CpipJ_CPIJ000420
I
csin106589
Clonorchis sinensis
csin106589
I
D918_06928
Trichuris suis
D918_06928
I
DAPPUDRAFT_300607
Daphnia pulex
DAPPUDRAFT_300607
I
DICVIV_05604
Dictyocaulus viviparus
DICVIV_05604
N
DILT_0000355601
Diphyllobothrium latum
DILT_0000355601
I
DME_0000409101
Dracunculus medinensis
DME_0000409101
I
ECANG7_02712
Echinococcus canadensis
ECANG7_02712
I
EEL_0000745801
Elaeophora elaphi
EEL_0000745801
N
EmuJ_001018300
Echinococcus multilocularis
EmuJ_001018300
I
ENSAPLG00000003593
Anas platyrhynchos
ENSAPLG00000003593
I
ENSAPLG00000009135
Anas platyrhynchos
ENSAPLG00000009135
I
ENSCSAG00000003430
Chlorocebus sabaeus
ENSCSAG00000003430
I
ENSFALG00000008280
Ficedula albicollis
ENSFALG00000008280
I
ENSLACG00000011178
Latimeria chalumnae
ENSLACG00000011178
I
ENSLOCG00000008877
Lepisosteus oculatus
ENSLOCG00000008877
I
ENSMEUG00000007556
Macropus eugenii
ENSMEUG00000007556
I
ENSONIG00000010000
Oreochromis niloticus
ENSONIG00000010000
I
ENSPFOG00000005752
Poecilia formosa
ENSPFOG00000005752
I
ENSPFOG00000015910
Poecilia formosa
ENSPFOG00000015910
I
ENSPFOG00000015984
Poecilia formosa
ENSPFOG00000015984
I
ENSPFOG00000024550
Poecilia formosa
ENSPFOG00000024550
I
ENSPMAG00000009833
Petromyzon marinus
ENSPMAG00000009833
I
ENSPSIG00000002483
Pelodiscus sinensis
ENSPSIG00000002483
I
ENSSHAG00000001186
Sarcophilus harrisii
ENSSHAG00000001186
I
ENSTSYG00000005021
Tarsius syrichta
ENSTSYG00000005021
I
ENSXMAG00000008595
Xiphophorus maculatus
ENSXMAG00000008595
I
ENSXMAG00000009618
Xiphophorus maculatus
ENSXMAG00000009618
I
ENSXMAG00000016280
Xiphophorus maculatus
ENSXMAG00000016280
I
estExt_fgenesh2_pg.C_20279
Branchiostoma floridae
estExt_fgenesh2_pg.C_20279
I
estExt_fgenesh2_pm.C_1880004
Branchiostoma floridae
estExt_fgenesh2_pm.C_1880004
I
EVEC_0000230001
Enterobius vermicularis
EVEC_0000230001
I
GA28973
Drosophila pseudoobscura
FBgn0250331
I
GD22774
Drosophila simulans
FBgn0194168
I
GE14935
Drosophila yakuba
FBgn0232525
I
GF20577
Drosophila ananassae
FBgn0097583
I
Gfo_R005758
Geospiza fortis
Gfo_R005758
I
GG24457
Drosophila erecta
FBgn0116589
I
GH10284
Drosophila grimshawi
FBgn0117765
I
GI17981
Drosophila mojavensis
FBgn0140721
I
GJ19553
Drosophila virilis
FBgn0206695
I
GK18268
Drosophila willistoni
FBgn0220267
I
GL26531
Drosophila persimilis
FBgn0164113
I
GM18164
Drosophila sechellia
FBgn0173071
I
GPUH_0002149301
Gongylonema pulchrum
GPUH_0002149301
I
GPUH_0002623401
Gongylonema pulchrum
GPUH_0002623401
I
HDID_0000986701
Hymenolepis diminuta
HDID_0000986701
I
HelroG186716
Helobdella robusta
HelroG186716
I
HHAL000023-PA
Halyomorpha halys
HHAL000023-PA
I
HmN_000160100
Hymenolepis microstoma
HmN_000160100
I
HNAJ_0000781101
Hymenolepis nana
HNAJ_0000781101
I
L596_g25216
Steinernema carpocapsae
L596_g25216
I
L798_03803
Zootermopsis nevadensis
L798_03803
I
LLOJ009024
Lutzomyia longipalpis
LLOJ009024
I
LOAG_07723
Loa loa
LOAG_07723
N
Mad
Drosophila melanogaster
FBgn0011648
D
MCOS_0000603801
Mesocestoides corti
MCOS_0000603801
I
MDOA012257
Musca domestica
MDOA012257
I
MDOA015236
Musca domestica
MDOA015236
I
MESCA008319
Megaselia scalaris
MESCA008319
I
Minc07882
Meloidogyne incognita
Minc07882
I
Myotis_brandtii_SMAD9_10010468
Myotis brandtii
Myotis_brandtii_SMAD9_10010468
I
nAv.1.0.1.g00979
Acanthocheilonema viteae
nAv.1.0.1.g00979
I
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
nDi.2.2.2.g04365
Dirofilaria immitis
nDi.2.2.2.g04365
I
NECAME_19535
Necator americanus
NECAME_19535
N
NEMVEDRAFT_v1g228395
Nematostella vectensis
NEMVEDRAFT_v1g228395
I
nLs.2.1.2.g04119
Litomosoides sigmodontis
nLs.2.1.2.g04119
I
nOo.2.0.1.g11302
Onchocerca ochengi
nOo.2.0.1.g11302
I
OFLC_0001565801
Onchocerca flexuosa
OFLC_0001565801
I
PPAI007902
Phlebotomus papatasi
PPAI007902
I
PTRK_0001409600
Parastrongyloides trichosuri
PTRK_0001409600
I
Pvit_04328
Pogona vitticeps
Pvit_04328
I
RPRC008357
Rhodnius prolixus
RPRC008357
I
RSKR_0000926700
Rhabditophanes kr3021
RSKR_0000926700
I
scaffold778-EXSNAP2012.5
Pristionchus exspectatus
scaffold778-EXSNAP2012.5
N
SCUD_0000553301
Schistosoma curassoni
SCUD_0000553301
I
Sjc_0006780
Schistosoma japonicum
Sjc_0006780
I
SMAD1
Choloepus hoffmanni
ENSCHOG00000009259
I
smad1
Danio rerio
ENSDARG00000027199
I
smad1
Gasterosteus aculeatus
ENSGACG00000017230
I
SMAD1
Ochotona princeps
ENSOPRG00000012775
I
smad1
Oryzias latipes
ENSORLG00000007377
I
smad1
Tetraodon nigroviridis
ENSTNIG00000017720
I
smad1
Takifugu rubripes
ENSTRUG00000014344
I
smad1.S
Xenopus laevis
XB-GENE-6253892
I
SMAD5
Homo sapiens
ENSG00000113658
D
smad5
Gasterosteus aculeatus
ENSGACG00000018718
I
SMAD5
Ornithorhynchus anatinus
ENSOANG00000009906
I
smad5
Oryzias latipes
ENSORLG00000009395
I
SMAD9
Anolis carolinensis
ENSACAG00000004463
I
SMAD9
Gallus gallus
ENSGALG00000017050
I
SMAD9
Meleagris gallopavo
ENSMGAG00000015060
I
SMAD9
Myotis lucifugus
ENSMLUG00000006399
I
SMAD9
Monodelphis domestica
ENSMODG00000010017
I
smad9
Oryzias latipes
ENSORLG00000003956
I
SMAD9
Procavia capensis
ENSPCAG00000002604
I
SMAR012602
Strigamia maritima
SMAR012602
I
Smp_013060
Schistosoma mansoni
Smp_013060
I
SMRZ_0000889701
Schistosoma margrebowiei
SMRZ_0000889701
I
SMTD_0001194901
Schistosoma mattheei
SMTD_0001194901
I
SMU15039699
Schmidtea mediterranea
SMU15039699
I
SMUV_0000762601
Syphacia muris
SMUV_0000762601
I
SPAL_0000266700
Strongyloides papillosus
SPAL_0000266700
I
SROB_0000039301
Schistosoma rodhaini
SROB_0000039301
I
SSTP_0000598700
Strongyloides stercoralis
SSTP_0000598700
I
SVE_1899900
Strongyloides venezuelensis
SVE_1899900
I
T265_01150
Opisthorchis viverrini
T265_01150
I
Tal_R004657
Tyto alba
Tal_R004657
I
TASK_0000610701
Taenia asiatica
TASK_0000610701
I
TCLT_0000734101
Thelazia callipaeda
TCLT_0000734101
I
TCNE_0001440901
Toxocara canis
TCNE_0001440901
I
tetur04g09040
Tetranychus urticae
tetur04g09040
I
TMUE_s0173000400
Trichuris muris
TMUE_s0173000400
I
TsM_000781600
Taenia solium
TsM_000781600
I
TTAC_0000954401
Hydatigera taeniaeformis
TTAC_0000954401
I
TTRE_0000645601
Trichuris trichiura
TTRE_0000645601
I
WBGene00246233
Onchocerca volvulus
WBGene00246233
I
WUBG_01190
Wuchereria bancrofti
WUBG_01190
I