PBX3 (Ornithorhynchus anatinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOANG00000010436 T212878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.867 1.000
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.865 0.965
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.865 0.965
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.865 0.965
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.865 0.965
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.865 0.965
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.865 0.965
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.865 0.965
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.865 0.965
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.865 0.965
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.865 0.965
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.865 0.965
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.865 0.965
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.865 0.965
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.865 0.965
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.865 0.965
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.865 0.965
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.865 0.965
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.865 0.947
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.820 0.947
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.820 0.947
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.820 0.947
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.820 0.947
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.820 0.947
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.813 0.877
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.813 0.877
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.691 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.675 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000016541 Homeodomain 147 206

Links

Other Homeodomain family TFs
Other Ornithorhynchus anatinus TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_007350 Trichomonas vaginalis TVAG_007350 N
TVAG_008370 Trichomonas vaginalis TVAG_008370 I
TVAG_017810 Trichomonas vaginalis TVAG_017810 I
TVAG_018140 Trichomonas vaginalis TVAG_018140 I
TVAG_022870 Trichomonas vaginalis TVAG_022870 N
TVAG_030270 Trichomonas vaginalis TVAG_030270 N
TVAG_030320 Trichomonas vaginalis TVAG_030320 I
TVAG_030650 Trichomonas vaginalis TVAG_030650 N
TVAG_033530 Trichomonas vaginalis TVAG_033530 I
TVAG_033770 Trichomonas vaginalis TVAG_033770 I
TVAG_034560 Trichomonas vaginalis TVAG_034560 I
TVAG_041220 Trichomonas vaginalis TVAG_041220 I
TVAG_048500 Trichomonas vaginalis TVAG_048500 N
TVAG_048830 Trichomonas vaginalis TVAG_048830 I
TVAG_049600 Trichomonas vaginalis TVAG_049600 I
TVAG_050010 Trichomonas vaginalis TVAG_050010 I
TVAG_055730 Trichomonas vaginalis TVAG_055730 N
TVAG_057510 Trichomonas vaginalis TVAG_057510 N
TVAG_058550 Trichomonas vaginalis TVAG_058550 I
TVAG_058980 Trichomonas vaginalis TVAG_058980 N
TVAG_068520 Trichomonas vaginalis TVAG_068520 N
TVAG_069420 Trichomonas vaginalis TVAG_069420 N
TVAG_074130 Trichomonas vaginalis TVAG_074130 I
TVAG_078220 Trichomonas vaginalis TVAG_078220 N
TVAG_085400 Trichomonas vaginalis TVAG_085400 I
TVAG_105110 Trichomonas vaginalis TVAG_105110 I
TVAG_106110 Trichomonas vaginalis TVAG_106110 I
TVAG_122130 Trichomonas vaginalis TVAG_122130 I
TVAG_123330 Trichomonas vaginalis TVAG_123330 N
TVAG_131780 Trichomonas vaginalis TVAG_131780 N
TVAG_133720 Trichomonas vaginalis TVAG_133720 N
TVAG_138190 Trichomonas vaginalis TVAG_138190 I
TVAG_141020 Trichomonas vaginalis TVAG_141020 I
TVAG_152080 Trichomonas vaginalis TVAG_152080 N
TVAG_161450 Trichomonas vaginalis TVAG_161450 N
TVAG_167420 Trichomonas vaginalis TVAG_167420 N
TVAG_170760 Trichomonas vaginalis TVAG_170760 I
TVAG_170790 Trichomonas vaginalis TVAG_170790 I
TVAG_172760 Trichomonas vaginalis TVAG_172760 N
TVAG_173010 Trichomonas vaginalis TVAG_173010 N
TVAG_179440 Trichomonas vaginalis TVAG_179440 I
TVAG_181200 Trichomonas vaginalis TVAG_181200 I
TVAG_187200 Trichomonas vaginalis TVAG_187200 I
TVAG_187270 Trichomonas vaginalis TVAG_187270 N
TVAG_194980 Trichomonas vaginalis TVAG_194980 I
TVAG_200950 Trichomonas vaginalis TVAG_200950 I
TVAG_203070 Trichomonas vaginalis TVAG_203070 N
TVAG_203550 Trichomonas vaginalis TVAG_203550 I
TVAG_207810 Trichomonas vaginalis TVAG_207810 N
TVAG_208090 Trichomonas vaginalis TVAG_208090 I
TVAG_208170 Trichomonas vaginalis TVAG_208170 I
TVAG_208390 Trichomonas vaginalis TVAG_208390 N
TVAG_209560 Trichomonas vaginalis TVAG_209560 I
TVAG_210220 Trichomonas vaginalis TVAG_210220 N
TVAG_213270 Trichomonas vaginalis TVAG_213270 I
TVAG_215750 Trichomonas vaginalis TVAG_215750 N
TVAG_217510 Trichomonas vaginalis TVAG_217510 I
TVAG_218720 Trichomonas vaginalis TVAG_218720 I
TVAG_223440 Trichomonas vaginalis TVAG_223440 I
TVAG_223860 Trichomonas vaginalis TVAG_223860 I
TVAG_231870 Trichomonas vaginalis TVAG_231870 N
TVAG_236320 Trichomonas vaginalis TVAG_236320 I
TVAG_236380 Trichomonas vaginalis TVAG_236380 N
TVAG_242410 Trichomonas vaginalis TVAG_242410 I
TVAG_243160 Trichomonas vaginalis TVAG_243160 I
TVAG_255040 Trichomonas vaginalis TVAG_255040 N
TVAG_255490 Trichomonas vaginalis TVAG_255490 I
TVAG_258650 Trichomonas vaginalis TVAG_258650 I
TVAG_261460 Trichomonas vaginalis TVAG_261460 N
TVAG_262670 Trichomonas vaginalis TVAG_262670 N
TVAG_264480 Trichomonas vaginalis TVAG_264480 I
TVAG_269580 Trichomonas vaginalis TVAG_269580 N
TVAG_274390 Trichomonas vaginalis TVAG_274390 I
TVAG_281620 Trichomonas vaginalis TVAG_281620 I
TVAG_284950 Trichomonas vaginalis TVAG_284950 N
TVAG_286860 Trichomonas vaginalis TVAG_286860 I
TVAG_287290 Trichomonas vaginalis TVAG_287290 I
TVAG_287680 Trichomonas vaginalis TVAG_287680 I
TVAG_290350 Trichomonas vaginalis TVAG_290350 I
TVAG_297830 Trichomonas vaginalis TVAG_297830 I
TVAG_298530 Trichomonas vaginalis TVAG_298530 I
TVAG_298590 Trichomonas vaginalis TVAG_298590 N
TVAG_300190 Trichomonas vaginalis TVAG_300190 N
TVAG_304110 Trichomonas vaginalis TVAG_304110 I
TVAG_312030 Trichomonas vaginalis TVAG_312030 I
TVAG_314440 Trichomonas vaginalis TVAG_314440 N
TVAG_315670 Trichomonas vaginalis TVAG_315670 I
TVAG_315700 Trichomonas vaginalis TVAG_315700 I
TVAG_317130 Trichomonas vaginalis TVAG_317130 N
TVAG_317360 Trichomonas vaginalis TVAG_317360 I
TVAG_318220 Trichomonas vaginalis TVAG_318220 I
TVAG_320670 Trichomonas vaginalis TVAG_320670 I
TVAG_321230 Trichomonas vaginalis TVAG_321230 I
TVAG_331810 Trichomonas vaginalis TVAG_331810 N
TVAG_332350 Trichomonas vaginalis TVAG_332350 N
TVAG_333520 Trichomonas vaginalis TVAG_333520 I
TVAG_336250 Trichomonas vaginalis TVAG_336250 I
TVAG_347110 Trichomonas vaginalis TVAG_347110 I
TVAG_353210 Trichomonas vaginalis TVAG_353210 N
TVAG_355890 Trichomonas vaginalis TVAG_355890 N
TVAG_356380 Trichomonas vaginalis TVAG_356380 N
TVAG_356580 Trichomonas vaginalis TVAG_356580 I
TVAG_356990 Trichomonas vaginalis TVAG_356990 N
TVAG_357700 Trichomonas vaginalis TVAG_357700 N
TVAG_358740 Trichomonas vaginalis TVAG_358740 I
TVAG_364890 Trichomonas vaginalis TVAG_364890 N
TVAG_366770 Trichomonas vaginalis TVAG_366770 N
TVAG_377090 Trichomonas vaginalis TVAG_377090 N
TVAG_382960 Trichomonas vaginalis TVAG_382960 N
TVAG_384340 Trichomonas vaginalis TVAG_384340 I
TVAG_384790 Trichomonas vaginalis TVAG_384790 N
TVAG_384980 Trichomonas vaginalis TVAG_384980 I
TVAG_385530 Trichomonas vaginalis TVAG_385530 N
TVAG_389220 Trichomonas vaginalis TVAG_389220 N
TVAG_398170 Trichomonas vaginalis TVAG_398170 I
TVAG_406620 Trichomonas vaginalis TVAG_406620 I
TVAG_407290 Trichomonas vaginalis TVAG_407290 I
TVAG_417620 Trichomonas vaginalis TVAG_417620 I
TVAG_418100 Trichomonas vaginalis TVAG_418100 N
TVAG_418370 Trichomonas vaginalis TVAG_418370 I
TVAG_422850 Trichomonas vaginalis TVAG_422850 I
TVAG_424630 Trichomonas vaginalis TVAG_424630 N
TVAG_428400 Trichomonas vaginalis TVAG_428400 I
TVAG_429070 Trichomonas vaginalis TVAG_429070 N
TVAG_431290 Trichomonas vaginalis TVAG_431290 I
TVAG_433330 Trichomonas vaginalis TVAG_433330 N
TVAG_439000 Trichomonas vaginalis TVAG_439000 N
TVAG_443860 Trichomonas vaginalis TVAG_443860 I
TVAG_446510 Trichomonas vaginalis TVAG_446510 I
TVAG_448590 Trichomonas vaginalis TVAG_448590 I
TVAG_449370 Trichomonas vaginalis TVAG_449370 N
TVAG_450400 Trichomonas vaginalis TVAG_450400 I
TVAG_451310 Trichomonas vaginalis TVAG_451310 I
TVAG_458610 Trichomonas vaginalis TVAG_458610 N
TVAG_464320 Trichomonas vaginalis TVAG_464320 I
TVAG_466400 Trichomonas vaginalis TVAG_466400 I
TVAG_469490 Trichomonas vaginalis TVAG_469490 N
TVAG_469670 Trichomonas vaginalis TVAG_469670 I
TVAG_471660 Trichomonas vaginalis TVAG_471660 I
TVAG_472310 Trichomonas vaginalis TVAG_472310 N
TVAG_474270 Trichomonas vaginalis TVAG_474270 I
TVAG_481770 Trichomonas vaginalis TVAG_481770 I
TVAG_484220 Trichomonas vaginalis TVAG_484220 N
TVAG_484270 Trichomonas vaginalis TVAG_484270 I
TVAG_485740 Trichomonas vaginalis TVAG_485740 I
TVAG_488790 Trichomonas vaginalis TVAG_488790 N
TVAG_490690 Trichomonas vaginalis TVAG_490690 I
TVAG_492320 Trichomonas vaginalis TVAG_492320 I
TVAG_494850 Trichomonas vaginalis TVAG_494850 I
TVAG_500220 Trichomonas vaginalis TVAG_500220 I
TVAG_501520 Trichomonas vaginalis TVAG_501520 I
TVAG_511900 Trichomonas vaginalis TVAG_511900 I
TVAG_514140 Trichomonas vaginalis TVAG_514140 I
TVAG_514390 Trichomonas vaginalis TVAG_514390 N
TVAG_515220 Trichomonas vaginalis TVAG_515220 N
TVAG_518010 Trichomonas vaginalis TVAG_518010 I
TVAG_518770 Trichomonas vaginalis TVAG_518770 I
TVAG_520250 Trichomonas vaginalis TVAG_520250 N
TVAG_520380 Trichomonas vaginalis TVAG_520380 N
TVAG_525230 Trichomonas vaginalis TVAG_525230 I
TVAG_527500 Trichomonas vaginalis TVAG_527500 N
TVAG_528950 Trichomonas vaginalis TVAG_528950 I
TVAG_534250 Trichomonas vaginalis TVAG_534250 N
TVAG_535080 Trichomonas vaginalis TVAG_535080 I
TVAG_535180 Trichomonas vaginalis TVAG_535180 I
TVAG_538000 Trichomonas vaginalis TVAG_538000 N
TVAG_540060 Trichomonas vaginalis TVAG_540060 N
TVAG_544250 Trichomonas vaginalis TVAG_544250 N
TVAG_544290 Trichomonas vaginalis TVAG_544290 I
TVAG_547380 Trichomonas vaginalis TVAG_547380 I
TVAG_550490 Trichomonas vaginalis TVAG_550490 N
TVAG_551090 Trichomonas vaginalis TVAG_551090 I
TVAG_551410 Trichomonas vaginalis TVAG_551410 I
TVAG_552140 Trichomonas vaginalis TVAG_552140 N
TVAG_552810 Trichomonas vaginalis TVAG_552810 I
TVAG_555690 Trichomonas vaginalis TVAG_555690 I
TVAG_555770 Trichomonas vaginalis TVAG_555770 N
TVAG_556150 Trichomonas vaginalis TVAG_556150 I
TVAG_563060 Trichomonas vaginalis TVAG_563060 I
TVAG_563360 Trichomonas vaginalis TVAG_563360 I
TVAG_565490 Trichomonas vaginalis TVAG_565490 N
TVAG_566490 Trichomonas vaginalis TVAG_566490 I
TVAG_568980 Trichomonas vaginalis TVAG_568980 I
TVAG_571520 Trichomonas vaginalis TVAG_571520 N
TVAG_578750 Trichomonas vaginalis TVAG_578750 I
TVAG_579060 Trichomonas vaginalis TVAG_579060 N
TVAG_579860 Trichomonas vaginalis TVAG_579860 I
TVAG_581440 Trichomonas vaginalis TVAG_581440 N
TVAG_590210 Trichomonas vaginalis TVAG_590210 I
TVAG_595500 Trichomonas vaginalis TVAG_595500 I
TVAG_595910 Trichomonas vaginalis TVAG_595910 I
TVAG_597870 Trichomonas vaginalis TVAG_597870 I
XBP1 Saccharomyces cerevisiae YIL101C D