CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSOARG00000009550 *(Ovis aries)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSOARG00000009550	T212986_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxa13 M00473_2.00	Mus musculus	NTTWAYDRN	NYHRTWAAN	PBM Berger et al.(2008) Hoxa13_3126	0.867	1.000
HOXA13 M03098_2.00	Homo sapiens	DKTTTATKRS	SYMATAAAMH	SELEX Jolma et al.(2013) HOXA13_1	0.867	1.000
HOXA13 M03099_2.00	Homo sapiens	NCTCGTAAAHN	NDTTTACGAGN	SELEX Jolma et al.(2013) HOXA13_2	0.867	1.000
HOXA13 M03100_2.00	Homo sapiens	DKTTTATKRS	SYMATAAAMH	SELEX Jolma et al.(2013) HOXA13_3	0.867	1.000
HOXA13 M03101_2.00	Homo sapiens	NCTCGTAAAAH	DTTTTACGAGN	SELEX Jolma et al.(2013) HOXA13_4	0.867	1.000
HOXA13 M04977_2.00	Homo sapiens	DTTTTATKGGB	VCCMATAAAAH	SELEX Yin et al.(2017) HOXA13_eDBD_HT-SELEX_1	0.867	1.000
HOXA13 M04978_2.00	Homo sapiens	NCTCGTAAAHN	NDTTTACGAGN	SELEX Yin et al.(2017) HOXA13_eDBD_HT-SELEX_2	0.867	1.000
HOXA13 M04981_2.00	Homo sapiens	DTTTTATKRSN	NSYMATAAAAH	SELEX Yin et al.(2017) HOXA13_FL_HT-SELEX_1	0.867	1.000
HOXA13 M04982_2.00	Homo sapiens	NCTCGTAAAWH	DWTTTACGAGN	SELEX Yin et al.(2017) HOXA13_FL_HT-SELEX_2	0.867	1.000
HOXA13 M09134_2.00	Homo sapiens	VDTWTWATKGS	SCMATWAWAHB	Misc Kulakovskiy et al.(2013) HXA13_HUMAN.H11MO.0.C	0.867	1.000
Hoxa13 M09202_2.00	Mus musculus	VDTWTWATKGS	SCMATWAWAHB	Misc Kulakovskiy et al.(2013) HXA13_MOUSE.H11MO.0.C	0.867	1.000
HOXA13 M10653_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA13_01	0.867	1.000
HOXA13 M10654_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA13_02	0.867	1.000
HOXA13 M04979_2.00	Homo sapiens	DTTTTATTRSN	NSYAATAAAAH	SELEX Yin et al.(2017) HOXA13_eDBD_Methyl-HT-SELEX_1	0.867	1.000
HOXA13 M04980_2.00	Homo sapiens	NCTCGTAAAHN	NDTTTACGAGN	SELEX Yin et al.(2017) HOXA13_eDBD_Methyl-HT-SELEX_2	0.867	1.000
HOXA13 M04983_2.00	Homo sapiens	DKTTTATTGBN	NVCAATAAAMH	SELEX Yin et al.(2017) HOXA13_FL_Methyl-HT-SELEX_1	0.867	1.000
HOXA13 M04984_2.00	Homo sapiens	NCTCGTAAAWH	DWTTTACGAGN	SELEX Yin et al.(2017) HOXA13_FL_Methyl-HT-SELEX_2	0.867	1.000
Hoxc13 M00389_2.00	Mus musculus	NTTWAYDRNN	NNYHRTWAAN	PBM Berger et al.(2008) Hoxc13_3127	0.862	0.930
HOXC13 M03129_2.00	Homo sapiens	NTTTTATTRS	SYAATAAAAN	SELEX Jolma et al.(2013) HOXC13_1	0.862	0.930
HOXC13 M03130_2.00	Homo sapiens	NCTCGTAAAAH	DTTTTACGAGN	SELEX Jolma et al.(2013) HOXC13_2	0.862	0.930
HOXC13 M05072_2.00	Homo sapiens	RKTTTATKGSN	NSCMATAAAMY	SELEX Yin et al.(2017) HOXC13_eDBD_HT-SELEX_1	0.862	0.930
HOXC13 M05073_2.00	Homo sapiens	BCTCGTAAAMH	DKTTTACGAGV	SELEX Yin et al.(2017) HOXC13_eDBD_HT-SELEX_2	0.862	0.930
HOXC13 M10680_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXC13_Q2	0.862	0.930
HOXC13 M05074_2.00	Homo sapiens	BCTCGTAAAAH	DTTTTACGAGV	SELEX Yin et al.(2017) HOXC13_eDBD_Methyl-HT-SELEX	0.862	0.930
hoxd13a M02081_2.00	Danio rerio	WTTTATDR	YHATAAAW	PBM Weirauch et al.(2014) pTH6143	0.836	0.842
HOXD13 M00299_2.00	Homo sapiens	NTTWAYDDN	NHHRTWAAN	PBM Barrera et al.(2016) HOXD13_REF	0.834	0.895
Hoxd13 M00394_2.00	Mus musculus	NWTHRYDDN	NHHRYDAWN	PBM Berger et al.(2008) Hoxd13_2356	0.834	0.895
HOXD13 M03141_2.00	Homo sapiens	DTTTTATKRS	SYMATAAAAH	SELEX Jolma et al.(2013) HOXD13_1	0.834	0.895
HOXD13 M03142_2.00	Homo sapiens	BCTCGTAAAAH	DTTTTACGAGV	SELEX Jolma et al.(2013) HOXD13_2	0.834	0.895
Hoxd13 M03247_2.00	Mus musculus	DKTTTATTRS	SYAATAAAMH	SELEX Jolma et al.(2013) Hoxd13_1	0.834	0.895
Hoxd13 M03248_2.00	Mus musculus	DDTTTAYKAGN	NCTMRTAAAHH	SELEX Jolma et al.(2013) Hoxd13_2	0.834	0.895
HOXD13 M05122_2.00	Homo sapiens	GKTTTATKGSS	SSCMATAAAMC	SELEX Yin et al.(2017) HOXD13_eDBD_HT-SELEX_1	0.834	0.895
HOXD13 M05123_2.00	Homo sapiens	BCTCGTAAAMH	DKTTTACGAGV	SELEX Yin et al.(2017) HOXD13_eDBD_HT-SELEX_2	0.834	0.895
HOXD13 M10689_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD13_Q6	0.834	0.895
HOXD13 M00295_2.00	Homo sapiens	NTTWAYDDN	NHHRTWAAN	PBM Barrera et al.(2016) HOXD13_N298S	0.834	0.895
HOXD13 M05124_2.00	Homo sapiens	DDTTTATTRBB	VVYAATAAAHH	SELEX Yin et al.(2017) HOXD13_eDBD_Methyl-HT-SELEX_1	0.834	0.895
HOXD13 M05125_2.00	Homo sapiens	VCTCGTAAAAH	DTTTTACGAGB	SELEX Yin et al.(2017) HOXD13_eDBD_Methyl-HT-SELEX_2	0.834	0.895
HOXD13 M00300_2.00	Homo sapiens	WTTTATDR	YHATAAAW	PBM Barrera et al.(2016) HOXD13_S316C	0.834	0.877
HOXD13 M00293_2.00	Homo sapiens	NTTWAYDDNN	NNHHRTWAAN	PBM Barrera et al.(2016) HOXD13_I297V	0.834	0.877
HOXD13 M00298_2.00	Homo sapiens	NTTWAYDDN	NHHRTWAAN	PBM Barrera et al.(2016) HOXD13_R306W	0.826	0.877
HOXD13 M00294_2.00	Homo sapiens	THGTWAAW	WTTWACDA	PBM Barrera et al.(2016) HOXD13_I322L	0.816	0.877
HOXB13 M02092_2.00	Homo sapiens	NTTWAYDDNN	NNHHRTWAAN	PBM Weirauch et al.(2014) pTH5808	0.709	0.842
Hoxb13 M00505_2.00	Mus musculus	NTTWAYDDNN	NNHHRTWAAN	PBM Berger et al.(2008) Hoxb13_3479	0.709	0.842
HOXB13 M03175_2.00	Homo sapiens	DTTTTATKGG	CCMATAAAAH	SELEX Jolma et al.(2013) HOXB13_1	0.709	0.842
HOXB13 M03176_2.00	Homo sapiens	BCTCGTAAAAH	DTTTTACGAGV	SELEX Jolma et al.(2013) HOXB13_2	0.709	0.842
HOXB13 M05201_2.00	Homo sapiens	DTTTTATKGGN	NCCMATAAAAH	SELEX Yin et al.(2017) HOXB13_eDBD_HT-SELEX_1	0.709	0.842
HOXB13 M05202_2.00	Homo sapiens	NCTCGTAAAHH	DDTTTACGAGN	SELEX Yin et al.(2017) HOXB13_eDBD_HT-SELEX_2	0.709	0.842
HOXB13 M09149_2.00	Homo sapiens	TTTTATDRSN	NSYHATAAAA	Misc Kulakovskiy et al.(2013) HXB13_HUMAN.H11MO.0.A	0.709	0.842
HOXB13 M05203_2.00	Homo sapiens	NCTCGTAAAAH	DTTTTACGAGN	SELEX Yin et al.(2017) HOXB13_eDBD_Methyl-HT-SELEX	0.709	0.842
cad M03780_2.00	Drosophila melanogaster	NKTTTATKRCHB	VDGYMATAAAMN	SELEX Nitta et al.(2015) cad_1	0.611	0.544
cad M03781_2.00	Drosophila melanogaster	NDTTTATKRCHN	NDGYMATAAAHN	SELEX Nitta et al.(2015) cad_2	0.611	0.544
cad M03782_2.00	Drosophila melanogaster	NDTTTATKRCNB	VNGYMATAAAHN	SELEX Nitta et al.(2015) cad_3	0.611	0.544
cad M03783_2.00	Drosophila melanogaster	NNTTTAYGRYNN	NNRYCRTAAANN	SELEX Nitta et al.(2015) cad_4	0.611	0.544
cad M06223_2.00	Drosophila melanogaster	HTTWATTR	YAATWAAD	B1H Zhu et al.(2011) Cad_Cell_FBgn0000251	0.611	0.544
cad M06224_2.00	Drosophila melanogaster	RBYVDAAMV	BKTTHBRVY	B1H Zhu et al.(2011) cad_FlyReg_FBgn0000251	0.611	0.544
cad M06225_2.00	Drosophila melanogaster	NTTWATKR	YMATWAAN	B1H Zhu et al.(2011) Cad_SOLEXA_FBgn0000251	0.611	0.544
cad M08420_2.00	Drosophila melanogaster	DTTTTATKRYY	RRYMATAAAAH	ChIP-chip Mathelier et al.(2014) MA0216.2	0.611	0.544
cad M09580_2.00	Drosophila melanogaster	DTTTAYGRYN	NRYCRTAAAH	Misc Heinz et al.(2010) Drosophila-Embryos_modEncode	0.611	0.544
cad M09674_2.00	Drosophila melanogaster	HTTTATKRBY	RVYMATAAAD	Misc Kulakovskiy et al.(2009) cad	0.611	0.544
cad M10783_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$CAD_Q6	0.611	0.544
HOXD13 M00296_2.00	Homo sapiens	GKATAAAH	DTTTATMC	PBM Barrera et al.(2016) HOXD13_Q325K	0.601	0.877
HOXD13 M00297_2.00	Homo sapiens	NWTWRKNNNN	NNNNMYWAWN	PBM Barrera et al.(2016) HOXD13_Q325R	0.601	0.877
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSOARP00000010250	Homeodomain	45	101	RKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK

Links
Other Homeodomain family TFs
Other *Ovis aries* TFs

275 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACRE_079180	Acremonium chrysogenum	ACRE_079180	I	0.000
BBA_04449	Beauveria bassiana	BBA_04449	I	0.000
Bcin07g02960	Botrytis cinerea	Bcin07g02960	I	0.000
BOTBODRAFT_92498	Botryobasidium botryosum	BOTBODRAFT_92498	I	0.000
CCM_07005	Cordyceps militaris	CCM_07005	I	0.000
CFIO01_10932	Colletotrichum fioriniae	CFIO01_10932	I	0.000
CGGC5_4872	Colletotrichum gloeosporioides	CGGC5_4872	I	0.000
CH063_09324	Colletotrichum higginsianum	CH063_09324	I	0.000
CHGG_05891	Chaetomium globosum	CHGG_05891	I	0.000
CMQ_8013	Grosmannia clavigera	CMQ_8013	I	0.000
Cob_08105	Colletotrichum orbiculare	Cob_08105	I	0.000
CPUR_03253	Claviceps purpurea	CPUR_03253	I	0.000
CSUB01_03838	Colletotrichum sublineola	CSUB01_03838	I	0.000
CTHT_0009000	Chaetomium thermophilum	CTHT_0009000	I	0.000
estExt_fgenesh1_pm.C_140003	Cryphonectria parasitica	estExt_fgenesh1_pm.C_140003	I	0.000
estExt_Genewise1.C_40527	Neurospora discreta	estExt_Genewise1.C_40527	I	0.000
F503_01009	Ophiostoma piceae uamh	F503_01009	I	0.000
FFUJ_01365	Fusarium fujikuroi	FFUJ_01365	I	0.000
FGRRES_15831	Fusarium graminearum	FGRRES_15831	I	0.000
FOXG_00218	Fusarium oxysporum	FOXG_00218	I	0.000
FPSE_02604	Fusarium pseudograminearum	FPSE_02604	I	0.000
FVEG_01300	Fusarium verticillioides	FVEG_01300	I	0.000
GGTG_04163	Gaeumannomyces graminis	GGTG_04163	I	0.000
GLRG_04053	Colletotrichum graminicola	GLRG_04053	I	0.000
HMPREF1624_03694	Sporothrix schenckii	HMPREF1624_03694	I	0.000
MAC_04202	Metarhizium acridum	MAC_04202	I	0.000
MAJ_02156	Metarhizium majus	MAJ_02156	I	0.000
MAM_07644	Metarhizium album	MAM_07644	I	0.000
MANI_024675	Metarhizium anisopliae	MANI_024675	I	0.000
MAPG_00558	Magnaporthe poae	MAPG_00558	I	0.000
MBR_03633	Metarhizium brunneum	MBR_03633	I	0.000
MGG_10837	Magnaporthe oryzae	MGG_10837	I	0.000
MGU_04823	Metarhizium guizhouense	MGU_04823	I	0.000
MYCTH_2296905	Myceliophthora thermophila	MYCTH_2296905	I	0.000
NCU02957	Neurospora crassa	NCU02957	D	0.000
NEUTE1DRAFT_150703	Neurospora tetrasperma	NEUTE1DRAFT_150703	I	0.000
OIDMADRAFT_110480	Oidiodendron maius	OIDMADRAFT_110480	I	0.000
OIDMADRAFT_57256	Oidiodendron maius	OIDMADRAFT_57256	I	0.000
PODANS_1_18420	Podospora anserina	PODANS_1_18420	I	0.000
S40285_00887	Stachybotrys chlorohalonata	S40285_00887	I	0.000
S40288_08146	Stachybotrys chartarum	S40288_08146	I	0.000
SAPIO_CDS5040	Scedosporium apiospermum	SAPIO_CDS5040	I	0.000
SBOR_5241	Sclerotinia borealis	SBOR_5241	I	0.000
SMAC_00493	Sordaria macrospora	SMAC_00493	I	0.000
SPBR_01576	Sporothrix brasiliensis	SPBR_01576	I	0.000
SS1G_01995	Sclerotinia sclerotiorum	SS1G_01995	I	0.000
THITE_2112332	Thielavia terrestris	THITE_2112332	I	0.000
TRIATDRAFT_299973	Trichoderma atroviride	TRIATDRAFT_299973	I	0.000
TRIREDRAFT_122371	Trichoderma reesei	TRIREDRAFT_122371	I	0.000
TRIVIDRAFT_35604	Trichoderma virens	TRIVIDRAFT_35604	I	0.000
UV8b_5697	Ustilaginoidea virens	UV8b_5697	I	0.000
VDAG_03292	Verticillium dahliae	VDAG_03292	I	0.000
VDBG_06134	Verticillium alfalfae	VDBG_06134	I	0.000
VDBG_06134	Verticillium albo atrum	VDBG_06134	I	0.000
VHEMI06417	Torrubiella hemipterigena	VHEMI06417	I	0.000
X797_003690	Metarhizium robertsii	X797_003690	I	0.000

ENSOARG00000009550 (Ovis aries) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

275 Related TFs

ENSOARG00000009550 **(Ovis aries)
Homeodomain**