ENSOPRG00000004641 (Ochotona princeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOPRG00000004641 T213726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.735 0.422
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.735 0.422
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.735 0.422
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.735 0.422
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.735 0.422
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.735 0.422
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.735 0.422
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.735 0.422
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.735 0.422
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.680 0.244
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.680 0.244
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.680 0.244
Lhx1
M00405_2.00 		Mus musculus
TRATDRNNN
NNNYHATYA		 PBM
Berger et al.(2008)
Lhx1_2240 		0.360 1.000
Lhx5
M00445_2.00 		Mus musculus
TAATKRNNN
NNNYMATTA		 PBM
Berger et al.(2008)
Lhx5_2279 		0.360 1.000
LHX1
M05410_2.00 		Homo sapiens
NTRATBRN
NYVATYAN		 SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX 		0.360 1.000
LHX5
M04936_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX 		0.360 1.000
LHX1
M05411_2.00 		Homo sapiens
NHRAYGHN
NDCRTYDN		 SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX 		0.360 1.000
LHX5
M04937_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1 		0.360 1.000
LHX5
M04938_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2 		0.360 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000004260 Homeodomain 123 168

Links

Other Homeodomain family TFs
Other Ochotona princeps TFs

1327 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014243 Ricinus communis 30170.m014243 N 0.000
AARA011457 Anopheles arabiensis AARA011457 I 0.619
ACUA001481 Anopheles culicifacies ACUA001481 I 0.601
ACYPI55918 Acyrthosiphon pisum ACYPI55918 I 0.603
AFAF013036 Anopheles farauti AFAF013036 I 0.634
AFAF020197 Anopheles farauti AFAF020197 I 0.630
AFUN008465 Anopheles funestus AFUN008465 I 0.619
Alligator_sinensis_CCG010661.1 Alligator sinensis Alligator_sinensis_CCG010661.1 I 0.607
ALUE_0001569401 Ascaris lumbricoides ALUE_0001569401 I 0.608
AMAM003654 Anopheles maculatus AMAM003654 I 0.616
AMEC008489 Anopheles melas AMEC008489 I 0.619
ANCDUO_12194 Ancylostoma duodenale ANCDUO_12194 I 0.636
AQUA005938 Anopheles quadriannulatus AQUA005938 I 0.630
ASIS009140 Anopheles sinensis ASIS009140 I 0.619
ASU_12993 Ascaris suum ASU_12993 I 0.636
BGIOSGA023284 Oryza indica BGIOSGA023284 N 0.000
BGLB004725 Biomphalaria glabrata BGLB004725 I 0.613
BRADI1G35790 Brachypodium distachyon BRADI1G35790 N 0.000
Brh_R005942 Buceros rhinoceros Brh_R005942 I 0.616
BTMF_0000212801 Brugia timori BTMF_0000212801 I 0.635
BZIP50 Oryza sativa OS06G0622700 N 0.000
Ca_20172 Cicer arietinum Ca_20172 N 0.000
CGI_10025343 Crassostrea gigas CGI_10025343 I 0.360
Cla023847 Citrullus lanatus Cla023847 N 0.000
CLEC013163 Cimex lectularius CLEC013163 I 0.619
Cmyd_10010796 Chelonia mydas Cmyd_10010796 I 0.607
Cmyd_10020021 Chelonia mydas Cmyd_10020021 I 0.360
CPIJ001077 Culex quinquefasciatus CPIJ001077 I 0.619
CpipJ_CPIJ001077 Culex pipiens CpipJ_CPIJ001077 I 0.619
Cucsa.272470 Cucumis sativus Cucsa.272470 N 0.000
D918_09140 Trichuris suis D918_09140 I 0.360
DAPPUDRAFT_57557 Daphnia pulex DAPPUDRAFT_57557 I 0.611
DICVIV_11777 Dictyocaulus viviparus DICVIV_11777 I 0.612
DME_0000391201 Dracunculus medinensis DME_0000391201 I 0.628
ECANG7_04683 Echinococcus canadensis ECANG7_04683 I 0.636
EEL_0000283401 Elaeophora elaphi EEL_0000283401 I 0.613
EFV52646 Trichinella spiralis EFV52646 I 0.360
EmuJ_000791300 Echinococcus multilocularis EmuJ_000791300 I 0.636
ENSACAG00000005037 Anolis carolinensis ENSACAG00000005037 I 0.360
ENSAMEG00000008305 Ailuropoda melanoleuca ENSAMEG00000008305 I 0.360
ENSAMEG00000008592 Ailuropoda melanoleuca ENSAMEG00000008592 I 0.360
ENSAPLG00000007956 Anas platyrhynchos ENSAPLG00000007956 I 0.628
ENSBTAP00000004042-D1 Bos grunniens ENSBTAP00000004042-D1 I 0.360
ENSCSAG00000002361 Chlorocebus sabaeus ENSCSAG00000002361 I 0.360
ENSCSAG00000006059 Chlorocebus sabaeus ENSCSAG00000006059 I 0.360
ENSDNOG00000040223 Dasypus novemcinctus ENSDNOG00000040223 I 0.602
ENSETEG00000006944 Echinops telfairi ENSETEG00000006944 I 0.635
ENSFALG00000005291 Ficedula albicollis ENSFALG00000005291 I 0.360
ENSFALG00000007758 Ficedula albicollis ENSFALG00000007758 I 0.360
ENSGGOG00000013955 Gorilla gorilla ENSGGOG00000013955 I 0.602
ENSGMOG00000001730 Gadus morhua ENSGMOG00000001730 I 0.360
ENSGMOG00000002984 Gadus morhua ENSGMOG00000002984 I 0.360
ENSLACG00000004119 Latimeria chalumnae ENSLACG00000004119 I 0.360
ENSLACG00000018094 Latimeria chalumnae ENSLACG00000018094 I 0.360
ENSLOCG00000004960 Lepisosteus oculatus ENSLOCG00000004960 I 0.360
ENSLOCG00000008328 Lepisosteus oculatus ENSLOCG00000008328 I 0.360
ENSMEUG00000006658 Macropus eugenii ENSMEUG00000006658 I 0.360
ENSMICG00000002512 Microcebus murinus ENSMICG00000002512 I 0.628
ENSMMUG00000001577 Macaca mulatta ENSMMUG00000001577 I 0.360
ENSMMUG00000021668 Macaca mulatta ENSMMUG00000021668 I 0.360
ENSMMUP00000034710 Macaca fascicularis ENSMMUP00000034710 I 0.360
ENSMODG00000027538 Monodelphis domestica ENSMODG00000027538 I 0.360
ENSMPUG00000002688 Mustela putorius furo ENSMPUG00000002688 I 0.360
ENSMPUG00000015060 Mustela putorius furo ENSMPUG00000015060 I 0.360
ENSNLEG00000000189 Nomascus leucogenys ENSNLEG00000000189 I 0.360
ENSNLEG00000002343 Nomascus leucogenys ENSNLEG00000002343 I 0.360
ENSOANG00000014248 Ornithorhynchus anatinus ENSOANG00000014248 I 0.360
ENSOARG00000000046 Ovis aries ENSOARG00000000046 I 0.360
ENSOARG00000000124 Ovis aries ENSOARG00000000124 I 0.607
ENSONIG00000010444 Oreochromis niloticus ENSONIG00000010444 I 0.360
ENSP00000254457-D1 Bos grunniens ENSP00000254457-D1 I 0.360
ENSP00000261731 Macaca fascicularis ENSP00000261731 I 0.360
ENSPANG00000019666 Papio anubis ENSPANG00000019666 I 0.360
ENSPANG00000022127 Papio anubis ENSPANG00000022127 I 0.360
ENSPFOG00000016138 Poecilia formosa ENSPFOG00000016138 I 0.360
ENSPPYG00000004992 Pongo abelii ENSPPYG00000004992 I 0.360
ENSPPYG00000008214 Pongo abelii ENSPPYG00000008214 I 0.360
ENSPPYG00000020680 Pongo abelii ENSPPYG00000020680 I 0.628
ENSPSIG00000005953 Pelodiscus sinensis ENSPSIG00000005953 I 0.360
ENSPSIG00000008536 Pelodiscus sinensis ENSPSIG00000008536 I 0.610
ENSPSIG00000016729 Pelodiscus sinensis ENSPSIG00000016729 I 0.360
ENSSHAG00000010404 Sarcophilus harrisii ENSSHAG00000010404 I 0.360
ENSSTOG00000021620 Ictidomys tridecemlineatus ENSSTOG00000021620 I 0.360
ENSSTOG00000022593 Ictidomys tridecemlineatus ENSSTOG00000022593 I 0.360
ENSXMAG00000005342 Xiphophorus maculatus ENSXMAG00000005342 I 0.360
EVEC_0000238601 Enterobius vermicularis EVEC_0000238601 I 0.628
F775_26495 Aegilops tauschii F775_26495 N 0.000
F775_42313 Aegilops tauschii F775_42313 I 0.617
fgenesh2_pg.scaffold_205000001 Branchiostoma floridae fgenesh2_pg.scaffold_205000001 I 0.624
fgenesh2_pg.scaffold_5000049 Branchiostoma floridae fgenesh2_pg.scaffold_5000049 I 0.615
GLYMA02G19754 Glycine max GLYMA02G19754 N 0.000
Gorai.009G309200 Gossypium raimondii Gorai.009G309200 N 0.000
GPLIN_000644800 Globodera pallida GPLIN_000644800 I 0.631
GPLIN_001075500 Globodera pallida GPLIN_001075500 I 0.614
GPUH_0000844301 Gongylonema pulchrum GPUH_0000844301 I 0.617
GPUH_0001825501 Gongylonema pulchrum GPUH_0001825501 I 0.623
GRMZM2G025812 Zea mays GRMZM2G025812 N 0.000
GSMUA_Achr1G19750_001 Musa acuminata GSMUA_Achr1G19750_001 N 0.000
HDID_0000471501 Hymenolepis diminuta HDID_0000471501 I 0.619
HelroG67164 Helobdella robusta HelroG67164 I 0.628
HelroG67489 Helobdella robusta HelroG67489 I 0.632
HelroG70524 Helobdella robusta HelroG70524 I 0.360
HelroG92485 Helobdella robusta HelroG92485 I 0.618
HHAL002696-PA Halyomorpha halys HHAL002696-PA I 0.619
HMEL004647 Heliconius melpomene HMEL004647 I 0.601
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.619
HNAJ_0000718601 Hymenolepis nana HNAJ_0000718601 I 0.605
HOXC4 Echinops telfairi ENSETEG00000017258 I 0.618
Hsal_06667--XP_001121341.1_APIME Harpegnathos saltator Hsal_06667--XP_001121341.1_APIME I 0.613
ISCW002094 Ixodes scapularis ISCW002094 I 0.619
KLTH0F00242g Lachancea thermotolerans KLTH0F00242g I 0.599
KLTH0F00242g Kluyveromyces thermotolerans KLTH0F00242g I 0.599
L798_02155 Zootermopsis nevadensis L798_02155 I 0.601
LCUP012257 Lucilia cuprina LCUP012257 I 0.619
LCUP013886 Lucilia cuprina LCUP013886 I 0.601
LDEC001243 Leptinotarsa decemlineata LDEC001243 I 0.617
LHX1 Anolis carolinensis ENSACAG00000002508 I 0.360
LHX1 Bos taurus ENSBTAG00000033562 I 0.360
LHX1 Canis familiaris ENSCAFG00000017853 I 0.360
LHX1 Callithrix jacchus ENSCJAG00000015458 I 0.360
LHX1 Cavia porcellus ENSCPOG00000027154 I 0.360
LHX1 Dasypus novemcinctus ENSDNOG00000036189 I 0.360
Lhx1 Dipodomys ordii ENSDORG00000006956 I 0.360
LHX1 Equus caballus ENSECAG00000001597 I 0.360
LHX1 Erinaceus europaeus ENSEEUG00000002834 I 0.360
LHX1 Echinops telfairi ENSETEG00000003513 I 0.360
LHX1 Felis catus ENSFCAG00000005089 I 0.360
LHX1 Homo sapiens ENSG00000273706 D 0.360
LHX1 Gallus gallus ENSGALG00000005409 I 0.360
LHX1 Gorilla gorilla ENSGGOG00000002703 I 0.360
LHX1 Loxodonta africana ENSLAFG00000006400 I 0.360
LHX1 Myotis lucifugus ENSMLUG00000014749 I 0.360
Lhx1 Mus musculus ENSMUSG00000018698 D 0.360
LHX1 Oryctolagus cuniculus ENSOCUG00000024664 I 0.360
LHX1 Otolemur garnettii ENSOGAG00000013789 I 0.360
LHX1 Procavia capensis ENSPCAG00000006272 I 0.360
LHX1 Pan troglodytes ENSPTRG00000009050 I 0.360
LHX1 Pteropus vampyrus ENSPVAG00000015637 I 0.360
Lhx1 Rattus norvegicus ENSRNOG00000002812 I 0.360
LHX1 Sus scrofa ENSSSCG00000017692 I 0.360
LHX1 Tursiops truncatus ENSTTRG00000008900 I 0.360
lhx1 Xenopus tropicalis XB-GENE-482482 I 0.360
lhx1.L Xenopus laevis XB-GENE-856460 I 0.360
lhx1a Danio rerio ENSDARG00000014018 I 0.360
lhx1a Gasterosteus aculeatus ENSGACG00000013605 I 0.360
lhx1a Tetraodon nigroviridis ENSTNIG00000014399 I 0.360
lhx1a Takifugu rubripes ENSTRUG00000000174 I 0.360
lhx1b Danio rerio ENSDARG00000007944 I 0.360
LHX5 Bos taurus ENSBTAG00000003107 I 0.360
LHX5 Canis familiaris ENSCAFG00000009121 I 0.360
LHX5 Callithrix jacchus ENSCJAG00000009813 I 0.360
LHX5 Dasypus novemcinctus ENSDNOG00000010448 I 0.360
Lhx5 Dipodomys ordii ENSDORG00000002125 I 0.360
LHX5 Equus caballus ENSECAG00000016915 I 0.360
LHX5 Echinops telfairi ENSETEG00000006405 I 0.360
LHX5 Homo sapiens ENSG00000089116 D 0.360
Lhx5 Gallus gallus ENSGALG00000008303 I 0.360
LHX5 Gorilla gorilla ENSGGOG00000010583 I 0.360
LHX5 Loxodonta africana ENSLAFG00000015121 I 0.360
Lhx5 Mus musculus ENSMUSG00000029595 D 0.360
LHX5 Oryctolagus cuniculus ENSOCUG00000009321 I 0.360
LHX5 Otolemur garnettii ENSOGAG00000003519 I 0.360
LHX5 Procavia capensis ENSPCAG00000010694 I 0.360
LHX5 Pan troglodytes ENSPTRG00000005493 I 0.360
Lhx5 Rattus norvegicus ENSRNOG00000001392 I 0.360
LHX5 Sus scrofa ENSSSCG00000009869 I 0.360
LHX5 Tupaia belangeri ENSTBEG00000003770 I 0.360
lhx5 Xenopus tropicalis XB-GENE-490400 I 0.360
lhx5.S Xenopus laevis XB-GENE-865965 I 0.360
lmx1a Danio rerio ENSDARG00000020354 I 0.629
LOAG_14821 Loa loa LOAG_14821 I 0.611
LPERR06G17810 Leersia perrieri LPERR06G17810 N 0.000
Lus10040069.g Linum usitatissimum Lus10040069.g N 0.000
MCINX003994 Melitaea cinxia MCINX003994 I 0.601
MESCA000156 Megaselia scalaris MESCA000156 I 0.601
Minc09570 Meloidogyne incognita Minc09570 I 0.636
MLOC_22013 Hordeum vulgare MLOC_22013 N 0.000
MTR_1g050502 Medicago truncatula MTR_1g050502 N 0.000
Myotis_brandtii_LHX1_10031028 Myotis brandtii Myotis_brandtii_LHX1_10031028 I 0.360
nAv.1.0.1.g02632 Acanthocheilonema viteae nAv.1.0.1.g02632 I 0.628
NBR_0000086401 Nippostrongylus brasiliensis NBR_0000086401 I 0.633
nDi.2.2.2.g12576 Dirofilaria immitis nDi.2.2.2.g12576 I 0.636
nOo.2.0.1.g02038 Onchocerca ochengi nOo.2.0.1.g02038 I 0.624
nRc.2.0.1.g25699 Romanomermis culicivorax nRc.2.0.1.g25699 I 0.631
OB06G29280 Oryza brachyantha OB06G29280 N 0.000
OBART06G21250 Oryza barthii OBART06G21250 N 0.000
OESDEN_23981 Oesophagostomum dentatum OESDEN_23981 I 0.614
OFLC_0001553801 Onchocerca flexuosa OFLC_0001553801 I 0.611
OGLUM06G22450 Oryza glumaepatula OGLUM06G22450 N 0.000
OMERI01G31300 Oryza meridionalis OMERI01G31300 N 0.000
ONIVA06G25200 Oryza nivara ONIVA06G25200 N 0.000
OPUNC06G19380 Oryza punctata OPUNC06G19380 N 0.000
ORUFI06G22890 Oryza rufipogon ORUFI06G22890 N 0.000
Pavir.Da00593 Panicum virgatum Pavir.Da00593 N 0.000
pax6a Danio rerio ENSDARG00000103379 I 0.633
PEQ_0000511901 Parascaris equorum PEQ_0000511901 I 0.624
PGSC0003DMG400010008 Solanum tuberosum PGSC0003DMG400010008 N 0.000
PISMIDRAFT_174060 Pisolithus microcarpus PISMIDRAFT_174060 I 0.635
Ppa-dsc-1 Pristionchus pacificus PPA18697 I 0.612
Pvit_13537 Pogona vitticeps Pvit_13537 I 0.360
Pvit_16426 Pogona vitticeps Pvit_16426 I 0.360
RPRC003712 Rhodnius prolixus RPRC003712 I 0.619
Sakowv30042332m.g Saccoglossus kowalevskii Sakowv30042332m.g I 0.360
Sb04g006400 Sorghum bicolor Sb04g006400 N 0.000
Sb10g024430 Sorghum bicolor Sb10g024430 N 0.000
SBAD_0000661201 Soboliphyme baturini SBAD_0000661201 I 0.604
scaffold33-EXSNAP2012.21 Pristionchus exspectatus scaffold33-EXSNAP2012.21 I 0.612
SCUD_0001059601 Schistosoma curassoni SCUD_0001059601 I 0.631
SCUD_0002251201 Schistosoma curassoni SCUD_0002251201 I 0.630
SCUD_0002260901 Schistosoma curassoni SCUD_0002260901 I 0.627
Si006978m.g Setaria italica Si006978m.g N 0.000
Si017847m.g Setaria italica Si017847m.g N 0.000
SINV17239 Solenopsis invicta SINV17239 I 0.602
Sjc_0024500 Schistosoma japonicum Sjc_0024500 I 0.627
SMAR007885 Strigamia maritima SMAR007885 I 0.360
SMRZ_0001120301 Schistosoma margrebowiei SMRZ_0001120301 I 0.631
SMTD_0002114601 Schistosoma mattheei SMTD_0002114601 I 0.631
SMTD_0002181901 Schistosoma mattheei SMTD_0002181901 I 0.627
SNAPOd2T00015974001 Oikopleura dioica SNAPOd2T00015974001 I 0.620
SNAPOd2T00015976001 Oikopleura dioica SNAPOd2T00015976001 I 0.624
Solyc04g082890.2 Solanum lycopersicum Solyc04g082890.2 N 0.000
SPER_0003668801 Spirometra erinaceieuropaei SPER_0003668801 I 0.616
SPU_006991 Strongylocentrotus purpuratus SPU_006991 I 0.360
SVUK_0001528201 Strongylus vulgaris SVUK_0001528201 I 0.620
TASK_0000693901 Taenia asiatica TASK_0000693901 I 0.609
TASK_0001023301 Taenia asiatica TASK_0001023301 I 0.631
TCNE_0000805901 Toxocara canis TCNE_0000805901 I 0.632
TMUE_s0059000100 Trichuris muris TMUE_s0059000100 I 0.360
Traes_7AL_25850F96F Triticum aestivum Traes_7AL_25850F96F N 0.000
Traes_7DL_3CE000E38 Triticum aestivum Traes_7DL_3CE000E38 N 0.000
TRE_0001706901 Trichobilharzia regenti TRE_0001706901 I 0.635
TRIUR3_33804 Triticum urartu TRIUR3_33804 N 0.000
TTAC_0000586501 Hydatigera taeniaeformis TTAC_0000586501 I 0.623
TTAC_0001116101 Hydatigera taeniaeformis TTAC_0001116101 I 0.609
YQE_01261 Dendroctonus ponderosae YQE_01261 I 0.631