ENSPMAG00000000895 (Petromyzon marinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPMAG00000000895 T214583_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Cdx2
M00447_2.00 		Mus musculus
NWWAYDRNN
NNYHRTWWN		 PBM
Berger et al.(2008)
Cdx2_4272 		0.688 0.807
Cdx2
M09193_2.00 		Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A 		0.688 0.807
Cdx2
M09572_2.00 		Mus musculus
NTTTTATKRC
GYMATAAAAN		 Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586 		0.688 0.821
CDX1
M10761_2.00 		Gallus gallus
BDBWAAK
MTTWVHV		 Transfac
Matys et al.(2006)
V$CDXA_01 		0.684 0.839
CDX1
M10762_2.00 		Gallus gallus
WWWWMYR
YRKWAWW		 Transfac
Matys et al.(2006)
V$CDXA_02 		0.684 0.825
Cdx1
M00427_2.00 		Mus musculus
NWWATDRNN
NNYHATWWN		 PBM
Berger et al.(2008)
Cdx1_2245 		0.684 0.807
CDX1
M03115_2.00 		Homo sapiens
NTTTATKRB
VYMATAAAN		 SELEX
Jolma et al.(2013)
CDX1_1 		0.684 0.821
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.684 0.821
CDX1
M05018_2.00 		Homo sapiens
VKTTTATKRCN
NGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX 		0.684 0.821
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.684 0.821
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.684 0.821
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.684 0.821
CDX1
M09140_2.00 		Homo sapiens
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C 		0.684 0.807
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.684 0.807
Cdx1
M09186_2.00 		Mus musculus
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C 		0.684 0.807
CDX1
M10670_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q4 		0.684 0.821
CDX1
M10671_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q5 		0.684 0.807
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.684 0.807
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.684 0.807
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.684 0.807
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.684 0.821
CDX1
M05019_2.00 		Homo sapiens
NGTCGTAAAWB
VWTTTACGACN		 SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX 		0.684 0.821
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.684 0.821
cad
M03780_2.00 		Drosophila melanogaster
NKTTTATKRCHB
VDGYMATAAAMN		 SELEX
Nitta et al.(2015)
cad_1 		0.673 0.714
cad
M03781_2.00 		Drosophila melanogaster
NDTTTATKRCHN
NDGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_2 		0.673 0.714
cad
M03782_2.00 		Drosophila melanogaster
NDTTTATKRCNB
VNGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_3 		0.673 0.714
cad
M03783_2.00 		Drosophila melanogaster
NNTTTAYGRYNN
NNRYCRTAAANN		 SELEX
Nitta et al.(2015)
cad_4 		0.673 0.714
cad
M06223_2.00 		Drosophila melanogaster
HTTWATTR
YAATWAAD		 B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251 		0.673 0.702
cad
M06224_2.00 		Drosophila melanogaster
RBYVDAAMV
BKTTHBRVY		 B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251 		0.673 0.714
cad
M06225_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251 		0.673 0.702
cad
M08420_2.00 		Drosophila melanogaster
DTTTTATKRYY
RRYMATAAAAH		 ChIP-chip
Mathelier et al.(2014)
MA0216.2 		0.673 0.714
cad
M09580_2.00 		Drosophila melanogaster
DTTTAYGRYN
NRYCRTAAAH		 Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode 		0.673 0.714
cad
M09674_2.00 		Drosophila melanogaster
HTTTATKRBY
RVYMATAAAD		 Misc
Kulakovskiy et al.(2009)
cad 		0.673 0.714
cad
M10783_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$CAD_Q6 		0.673 0.714
Q70LF3_ARTSF
M02211_2.00 		Artemia franciscana
BTAATTAB
VTAATTAV		 PBM
Weirauch et al.(2014)
pTH5553 		0.663 0.768
Cdx4
M09197_2.00 		Mus musculus
WGATTTATDRBH
DVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A 		0.652 0.772
CDX4
M05129_2.00 		Homo sapiens
VKTTTATKRCH
DGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX 		0.652 0.754
CDX4
M05130_2.00 		Homo sapiens
BGTCGTAAAHN
NDTTTACGACV		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1 		0.652 0.754
CDX4
M05131_2.00 		Homo sapiens
VKTTTATKGCN
NGCMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2 		0.652 0.754
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.643 0.632
Dbx2
M00499_2.00 		Mus musculus
NNDTNNN
NNNAHNN		 PBM
Berger et al.(2008)
Dbx2_3487 		0.643 0.518
Q9GP48_9TURB
M02217_2.00 		Discocelis tigrina
DTAATTAB
VTAATTAH		 PBM
Weirauch et al.(2014)
pTH6515 		0.617 0.667
Dbx1
M00451_2.00 		Mus musculus
WTTAATTA
TAATTAAW		 PBM
Berger et al.(2008)
Dbx1_3486 		0.614 0.491
Dbx
M02128_2.00 		Drosophila melanogaster
WTTAATTA
TAATTAAW		 PBM
Weirauch et al.(2014)
pTH6051 		0.614 0.500
Dbx
M06550_2.00 		Drosophila melanogaster
TTWATKA
TMATWAA		 B1H
Mathelier et al.(2014)
MA0174.1 		0.614 0.500
si:dkey-43p13.5
M02082_2.00 		Danio rerio
DNWNWWNWNH
DNWNWWNWNH		 PBM
Weirauch et al.(2014)
pTH6636 		0.605 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000000983 Homeodomain 10 66
ENSPMAP00000000984 Homeodomain 6 61

Links

Other Homeodomain family TFs
Other Petromyzon marinus TFs

453 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01044 Capronia coronata A1O1_01044 I 0.000
A1O3_07508 Capronia epimyces A1O3_07508 I 0.000
A1O5_04227 Cladophialophora psammophila A1O5_04227 I 0.000
A1O7_00090 Cladophialophora yegresii A1O7_00090 I 0.000
A1O9_05854 Exophiala aquamarina A1O9_05854 I 0.000
AB06017.1 Alternaria brassicicola AB06017.1 I 0.000
ACLA_028850 Aspergillus clavatus CADACLAG00001924 I 0.000
ACRE_060270 Acremonium chrysogenum ACRE_060270 I 0.000
AFUA_1G05740 Aspergillus fumigatus CADAFUAG00009185 I 0.000
ANIA_04096 Aspergillus nidulans CADANIAG00004583 I 0.000
AOL_s00006g245 Arthrobotrys oligospora AOL_s00006g245 I 0.000
ARB_05650 Arthroderma benhamiae ARB_05650 I 0.000
ATEG_03051 Aspergillus terreus CADATEAG00008253 I 0.000
AUEXF2481DRAFT_41506 Aureobasidium subglaciale AUEXF2481DRAFT_41506 I 0.000
BAUCODRAFT_60992 Baudoinia compniacensis BAUCODRAFT_60992 I 0.000
BBA_02258 Beauveria bassiana BBA_02258 I 0.000
Bcin10g04060 Botrytis cinerea Bcin10g04060 N 0.000
BDDG_03042 Blastomyces dermatitidis BDDG_03042 I 0.000
CADAFLAG00011101 Aspergillus flavus CADAFLAG00011101 I 0.000
CADANGAG00013990 Aspergillus niger CADANGAG00013990 I 0.000
CADAORAG00003823 Aspergillus oryzae CADAORAG00003823 I 0.000
CCM_07530 Cordyceps militaris CCM_07530 I 0.000
CFIO01_13446 Colletotrichum fioriniae CFIO01_13446 I 0.000
CGGC5_1863 Colletotrichum gloeosporioides CGGC5_1863 I 0.000
CH063_11948 Colletotrichum higginsianum CH063_11948 I 0.000
CHGG_05670 Chaetomium globosum CHGG_05670 I 0.000
CIMG_03889 Coccidioides immitis CIMG_03889 I 0.000
CMQ_3757 Grosmannia clavigera CMQ_3757 I 0.000
Cob_10120 Colletotrichum orbiculare Cob_10120 I 0.000
COCC4DRAFT_134495 Bipolaris maydis COCC4DRAFT_134495 I 0.000
COCCADRAFT_22142 Bipolaris zeicola COCCADRAFT_22142 I 0.000
COCMIDRAFT_9880 Bipolaris oryzae COCMIDRAFT_9880 I 0.000
COCSADRAFT_257479 Bipolaris sorokiniana COCSADRAFT_257479 I 0.000
COCVIDRAFT_95336 Bipolaris victoriae COCVIDRAFT_95336 I 0.000
CPC735_004550 Coccidioides posadasii CPC735_004550 I 0.000
CPUR_04988 Claviceps purpurea CPUR_04988 I 0.000
CSUB01_00446 Colletotrichum sublineola CSUB01_00446 I 0.000
CTHT_0070590 Chaetomium thermophilum CTHT_0070590 I 0.000
DOTSEDRAFT_117283 Dothistroma septosporum DOTSEDRAFT_117283 I 0.000
DRE_02096 Drechslerella stenobrocha DRE_02096 I 0.000
EPUS_05695 Endocarpon pusillum EPUS_05695 I 0.000
estExt_fgenesh1_pg.C_10584 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10584 I 0.000
estExt_Genewise1Plus.C_11490 Cryphonectria parasitica estExt_Genewise1Plus.C_11490 I 0.000
estExt_Genewise1Plus.C_120314 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_120314 I 0.000
estExt_Genewise1Plus.C_chr_12147 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12147 I 0.000
EURHEDRAFT_417489 Aspergillus ruber EURHEDRAFT_417489 I 0.000
EV44_g3192 Erysiphe necator EV44_g3192 I 0.000
e_gw1.10.564.1 Nectria haematococca e_gw1.10.564.1 I 0.000
F503_01489 Ophiostoma piceae uamh F503_01489 I 0.000
FFUJ_08637 Fusarium fujikuroi FFUJ_08637 I 0.000
fgenesh1_pg.00129_#_375 Aspergillus carbonarius fgenesh1_pg.00129_#_375 I 0.000
FGRRES_05503 Fusarium graminearum FGRRES_05503 I 0.000
FOXG_09390 Fusarium oxysporum FOXG_09390 I 0.000
FOXG_12539 Fusarium oxysporum FOXG_12539 I 0.000
FOXG_12589 Fusarium oxysporum FOXG_12589 I 0.000
FOXG_14000 Fusarium oxysporum FOXG_14000 I 0.000
FOXG_14257 Fusarium oxysporum FOXG_14257 I 0.000
FOXG_14422 Fusarium oxysporum FOXG_14422 I 0.000
FOXG_15059 Fusarium oxysporum FOXG_15059 I 0.000
FOXG_16414 Fusarium oxysporum FOXG_16414 I 0.000
FOXG_17084 Fusarium oxysporum FOXG_17084 I 0.000
FOXG_17123 Fusarium oxysporum FOXG_17123 I 0.000
FOXG_17458 Fusarium oxysporum FOXG_17458 I 0.000
FPSE_03500 Fusarium pseudograminearum FPSE_03500 I 0.000
FVEG_07022 Fusarium verticillioides FVEG_07022 I 0.000
G647_00099 Cladophialophora carrionii G647_00099 I 0.000
GGTG_09510 Gaeumannomyces graminis GGTG_09510 I 0.000
GLRG_00017 Colletotrichum graminicola GLRG_00017 I 0.000
GMDG_06731 Pseudogymnoascus destructans GMDG_06731 I 0.000
H072_10399 Dactylellina haptotyla H072_10399 I 0.000
H101_06443 Trichophyton interdigitale H101_06443 I 0.000
H102_07872 Trichophyton rubrum H102_07872 I 0.000
H105_07898 Trichophyton soudanense H105_07898 I 0.000
HCBG_06946 Histoplasma capsulatum HCBG_06946 I 0.000
HMPREF1120_00724 Exophiala dermatitidis HMPREF1120_00724 I 0.000
HMPREF1541_07706 Cyphellophora europaea HMPREF1541_07706 I 0.000
HMPREF1624_03143 Sporothrix schenckii HMPREF1624_03143 I 0.000
LEMA_P100560.1 Leptosphaeria maculans LEMA_P100560.1 I 0.000
M437DRAFT_37930 Aureobasidium melanogenum M437DRAFT_37930 I 0.000
M438DRAFT_348081 Aureobasidium pullulans M438DRAFT_348081 I 0.000
MAC_02526 Metarhizium acridum MAC_02526 I 0.000
MAM_01473 Metarhizium album MAM_01473 I 0.000
MANI_005719 Metarhizium anisopliae MANI_005719 I 0.000
MAPG_03268 Magnaporthe poae MAPG_03268 I 0.000
MBM_08363 Marssonina brunnea MBM_08363 I 0.000
MBR_07703 Metarhizium brunneum MBR_07703 I 0.000
MCYG_00925 Microsporum canis MCYG_00925 I 0.000
MGG_06243 Magnaporthe oryzae MGG_06243 I 0.000
MGU_03974 Metarhizium guizhouense MGU_03974 I 0.000
MGYG_01049 Microsporum gypseum MGYG_01049 I 0.000
MPH_05371 Macrophomina phaseolina MPH_05371 I 0.000
MYCFIDRAFT_85869 Pseudocercospora fijiensis MYCFIDRAFT_85869 I 0.000
Mycgr3G66346 Zymoseptoria tritici Mycgr3G66346 I 0.000
MYCTH_2303722 Myceliophthora thermophila MYCTH_2303722 I 0.000
NechaG47027 Fusarium solani NechaG47027 I 0.000
NEUTE1DRAFT_121878 Neurospora tetrasperma NEUTE1DRAFT_121878 I 0.000
NFIA_018990 Neosartorya fischeri CADNFIAG00002142 I 0.000
OCS_03334 Ophiocordyceps sinensis OCS_03334 I 0.000
OIDMADRAFT_114154 Oidiodendron maius OIDMADRAFT_114154 I 0.000
PAAG_01797 Paracoccidioides sp lutzii PAAG_01797 I 0.000
PABG_02082 Paracoccidioides brasiliensis PABG_02082 I 0.000
Pc18g01980 Penicillium chrysogenum Pc18g01980 I 0.000
PCH_Pc18g01980 Penicillium rubens PCH_Pc18g01980 I 0.000
PDE_02741 Penicillium oxalicum PDE_02741 I 0.000
PDIP_73700 Penicillium digitatum PDIP_73700 I 0.000
PEX1_008670 Penicillium expansum PEX1_008670 I 0.000
PFICI_08013 Pestalotiopsis fici PFICI_08013 I 0.000
PITC_028160 Penicillium italicum PITC_028160 I 0.000
PMAA_024490 Talaromyces marneffei PMAA_024490 I 0.000
PMAA_024490 Penicillium marneffei PMAA_024490 I 0.000
PTRG_03571 Pyrenophora triticirepentis PTRG_03571 I 0.000
PTT_11354 Pyrenophora teres PTT_11354 I 0.000
PV04_02012 Capronia semiimmersa PV04_02012 I 0.000
PV05_10908 Exophiala xenobiotica PV05_10908 I 0.000
PV06_03662 Exophiala oligosperma PV06_03662 I 0.000
PV07_10763 Cladophialophora immunda PV07_10763 I 0.000
PV09_07370 Verruconis gallopava PV09_07370 I 0.000
PV10_09032 Exophiala mesophila PV10_09032 I 0.000
PV11_07852 Exophiala sideris PV11_07852 I 0.000
PVAR5_7982 Byssochlamys spectabilis PVAR5_7982 I 0.000
S40285_00187 Stachybotrys chlorohalonata S40285_00187 I 0.000
S40288_09249 Stachybotrys chartarum S40288_09249 I 0.000
SAPIO_CDS5674 Scedosporium apiospermum SAPIO_CDS5674 I 0.000
SBOR_5824 Sclerotinia borealis SBOR_5824 N 0.000
scaffold_19-snap.13.1 Neurospora discreta scaffold_19-snap.13.1 I 0.000
SEPMUDRAFT_146085 Sphaerulina musiva SEPMUDRAFT_146085 I 0.000
SETTUDRAFT_160349 Setosphaeria turcica SETTUDRAFT_160349 I 0.000
SMAC_02170 Sordaria macrospora SMAC_02170 I 0.000
SNOG_01260 Stagonospora nodorum SNOG_01260 I 0.000
SNOG_01260 Phaeosphaeria nodorum SNOG_01260 I 0.000
SPBR_01226 Sporothrix brasiliensis SPBR_01226 I 0.000
SS1G_12532 Sclerotinia sclerotiorum SS1G_12532 N 0.000
TEQG_01439 Trichophyton equinum TEQG_01439 I 0.000
TESG_02341 Trichophyton tonsurans TESG_02341 I 0.000
THITE_60403 Thielavia terrestris THITE_60403 I 0.000
TRIATDRAFT_219427 Trichoderma atroviride TRIATDRAFT_219427 I 0.000
TRIREDRAFT_80668 Trichoderma reesei TRIREDRAFT_80668 I 0.000
TRIVIDRAFT_43951 Trichoderma virens TRIVIDRAFT_43951 I 0.000
TRV_01211 Trichophyton verrucosum TRV_01211 I 0.000
TSTA_033010 Talaromyces stipitatus TSTA_033010 I 0.000
U727_00431294321 Penicillium solitum U727_00431294321 I 0.000
UCRNP2_4046 Neofusicoccum parvum UCRNP2_4046 I 0.000
UREG_02076 Uncinocarpus reesii UREG_02076 I 0.000
UV8b_1298 Ustilaginoidea virens UV8b_1298 I 0.000
V499_09234 Pseudogymnoascus pannorum V499_09234 I 0.000
vad-3 Neurospora crassa NCU06407 D 0.000
VDAG_05809 Verticillium dahliae VDAG_05809 I 0.000
VDBG_06746 Verticillium albo atrum VDBG_06746 I 0.000
VDBG_06746 Verticillium alfalfae VDBG_06746 I 0.000
VHEMI08815 Torrubiella hemipterigena VHEMI08815 I 0.000
W97_08594 Coniosporium apollinis W97_08594 I 0.000
X797_003181 Metarhizium robertsii X797_003181 I 0.000
Z517_08892 Fonsecaea pedrosoi Z517_08892 I 0.000
Z518_07940 Rhinocladiella mackenziei Z518_07940 I 0.000
Z519_03507 Cladophialophora bantiana Z519_03507 I 0.000