ENSPPYG00000012447 (Pongo abelii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPPYG00000012447 T214736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 1.000
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 1.000
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 1.000
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.982
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.982
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.982
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000013901 Homeodomain 97 153

Links

Other Homeodomain family TFs
Other Pongo abelii TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006375 Calypte anna Aan_R006375 I
Afo_R011359 Aptenodytes forsteri Afo_R011359 I
Brh_R000963 Buceros rhinoceros Brh_R000963 I
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I
ENSCSAG00000014415 Chlorocebus sabaeus ENSCSAG00000014415 I
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I
Gfo_R008165 Geospiza fortis Gfo_R008165 I
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I
Pvit_04537 Pogona vitticeps Pvit_04537 I
REL Taeniopygia guttata ENSTGUG00000006743 I
REL Vicugna pacos ENSVPAG00000000493 I
REL Sus scrofa ENSSSCG00000008388 I
REL Otolemur garnettii ENSOGAG00000013722 I
REL Sorex araneus ENSSARG00000011809 I
Rel Rattus norvegicus ENSRNOG00000054437 I
rel Xenopus tropicalis XB-GENE-993262 I
REL Pteropus vampyrus ENSPVAG00000000364 I
rel Oryzias latipes ENSORLG00000001586 I
REL Bos taurus ENSBTAG00000015386 I
REL Canis familiaris ENSCAFG00000002981 I
REL Choloepus hoffmanni ENSCHOG00000010935 I
REL Callithrix jacchus ENSCJAG00000008975 I
REL Cavia porcellus ENSCPOG00000011659 I
rel Danio rerio ENSDARG00000055276 I
REL Equus caballus ENSECAG00000003277 I
REL Felis catus ENSFCAG00000008018 I
REL Homo sapiens ENSG00000162924 D
REL Gallus gallus ENSGALG00000007845 I
REL Gorilla gorilla ENSGGOG00000024826 I
REL Loxodonta africana ENSLAFG00000013507 I
REL Meleagris gallopavo ENSMGAG00000001721 I
REL Myotis lucifugus ENSMLUG00000007454 I
REL Macaca mulatta ENSMMUG00000010834 I
REL Monodelphis domestica ENSMODG00000002172 I
Rel Mus musculus ENSMUSG00000020275 D
REL Ornithorhynchus anatinus ENSOANG00000012405 I
REL Oryctolagus cuniculus ENSOCUG00000004968 I
REL Anolis carolinensis ENSACAG00000003030 I
REL Pan troglodytes ENSPTRG00000011949 I
rel.L Xenopus laevis XB-GENE-993266 I
rel.S Xenopus laevis XB-GENE-17342653 I
Tal_R011178 Tyto alba Tal_R011178 I