Irx2 (Rattus norvegicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSRNOG00000012742 T215400_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000017019 Homeodomain 116 175

Links

Other Homeodomain family TFs
Other Rattus norvegicus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
17440_YML027W Saccharomyces paradoxus 17440_YML027W I
A1O1_06861 Capronia coronata A1O1_06861 I
A1O3_10315 Capronia epimyces A1O3_10315 I
A1O5_07631 Cladophialophora psammophila A1O5_07631 I
A1O7_09958 Cladophialophora yegresii A1O7_09958 I
A1O9_06349 Exophiala aquamarina A1O9_06349 I
AB00260.1 Alternaria brassicicola AB00260.1 I
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I
ACRE_069570 Acremonium chrysogenum ACRE_069570 I
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I
ATEG_04171 Aspergillus terreus CADATEAG00009984 D
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I
BDDG_04023 Blastomyces dermatitidis BDDG_04023 I
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I
CaO19.7017 Candida albicans CaO19.7017 I
CD36_70900 Candida dubliniensis CD36_70900 I
CIMG_09634 Coccidioides immitis CIMG_09634 I
CLUG_04271 Candida lusitaniae CLUG_04271 I
CLUG_04271 Clavispora lusitaniae CLUG_04271 I
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I
CPC735_023880 Coccidioides posadasii CPC735_023880 I
CTRG_04888 Candida tropicalis CTRG_04888 I
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I
DRE_07453 Drechslerella stenobrocha DRE_07453 I
EPUS_07220 Endocarpon pusillum EPUS_07220 I
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I
G210_2310 Candida maltosa G210_2310 I
G647_08323 Cladophialophora carrionii G647_08323 I
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I
H072_1197 Dactylellina haptotyla H072_1197 I
H101_06850 Trichophyton interdigitale H101_06850 I
H102_08770 Trichophyton rubrum H102_08770 I
H105_08795 Trichophyton soudanense H105_08795 I
HCBG_03004 Histoplasma capsulatum HCBG_03004 I
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I
J056_000182 Wallemia ichthyophaga J056_000182 I
JL09_g4323 Pichia kudriavzevii JL09_g4323 I
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I
Kwal_18450 Kluyveromyces waltii Kwal_18450 I
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I
LELG_05443 Lodderomyces elongisporus LELG_05443 I
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I
MCYG_03024 Microsporum canis MCYG_03024 I
MGYG_00197 Microsporum gypseum MGYG_00197 I
MPH_01872 Macrophomina phaseolina MPH_01872 I
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I
Pc18g00190 Penicillium chrysogenum Pc18g00190 I
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I
PDE_04931 Penicillium oxalicum PDE_04931 I
PDIP_75510 Penicillium digitatum PDIP_75510 I
PEX1_077160 Penicillium expansum PEX1_077160 I
PICST_65833 Scheffersomyces stipitis PICST_65833 I
PITC_036250 Penicillium italicum PITC_036250 I
PMAA_076490 Talaromyces marneffei PMAA_076490 I
PMAA_076490 Penicillium marneffei PMAA_076490 I
PTRG_09990 Pyrenophora triticirepentis PTRG_09990 I
PV04_10601 Capronia semiimmersa PV04_10601 I
PV09_05311 Verruconis gallopava PV09_05311 I
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I
SNOG_10542 Stagonospora nodorum SNOG_10542 I
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I
SU7_2475 Saccharomyces arboricola SU7_2475 I
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I
TEQG_06412 Trichophyton equinum TEQG_06412 I
TESG_00798 Trichophyton tonsurans TESG_00798 I
TSTA_096850 Talaromyces stipitatus TSTA_096850 I
U727_00433932271 Penicillium solitum U727_00433932271 I
UREG_04594 Uncinocarpus reesii UREG_04594 I
UV8b_5567 Ustilaginoidea virens UV8b_5567 I
V499_00333 Pseudogymnoascus pannorum V499_00333 I
YOX1 Saccharomyces cerevisiae YML027W D
Z517_12283 Fonsecaea pedrosoi Z517_12283 I
Z518_06261 Rhinocladiella mackenziei Z518_06261 I
Z519_06193 Cladophialophora bantiana Z519_06193 I