CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC100364002
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000050457
T215496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rhox6
M00397_2.00
Mus musculus
NTAAYNMN
NKNRTTAN
PBM
Berger et al.(2008)
Rhox6_4251
0.754
0.825
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000066170
Homeodomain
152
208
RYSRTRFTPSQLRDLERLFQETRYPSLRTRKDIARWMGVEECDVQDWFRMRRSLFRR
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMUSG00000097200
Mus musculus
ENSMUSG00000097200
I
0.754
Rhox6
Mus musculus
ENSMUSG00000006200
D
0.754