CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cers3b
(
Tetraodon nigroviridis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTNIG00000019226
T216593_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000022426
Homeodomain
71
127
KDKVRLTVEPNPLLENYFCDQAKVPSQADVRSLCKKTSWSERRIQVWFRRRRNQDRP
Links
Other
Homeodomain
family TFs
Other
Tetraodon nigroviridis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cers2a
Danio rerio
ENSDARG00000013704
N
0.740
cers3b
Takifugu rubripes
ENSTRUG00000004671
N
0.623
cers4a
Tetraodon nigroviridis
ENSTNIG00000015527
N
0.681
cers4a
Takifugu rubripes
ENSTRUG00000012847
N
0.701
ENSAMXG00000004106
Astyanax mexicanus
ENSAMXG00000004106
N
0.774
ENSGALG00000029052
Gallus gallus
ENSGALG00000029052
N
0.599
ENSGMOG00000002912
Gadus morhua
ENSGMOG00000002912
N
0.616
ENSGMOG00000016733
Gadus morhua
ENSGMOG00000016733
N
0.623
ENSLOCG00000012751
Lepisosteus oculatus
ENSLOCG00000012751
N
0.638
ENSMGAG00000006564
Meleagris gallopavo
ENSMGAG00000006564
N
0.611
ENSONIG00000015112
Oreochromis niloticus
ENSONIG00000015112
N
0.653
ENSPFOG00000008203
Poecilia formosa
ENSPFOG00000008203
N
0.607
ENSPFOG00000013108
Poecilia formosa
ENSPFOG00000013108
N
0.642
ENSPFOG00000019166
Poecilia formosa
ENSPFOG00000019166
N
0.725
ENSTNIG00000001899
Tetraodon nigroviridis
ENSTNIG00000001899
N
0.681
ENSXMAG00000003751
Xiphophorus maculatus
ENSXMAG00000003751
N
0.726