IRX4 (Tursiops truncatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTTRG00000001981 T216912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000001859 Homeodomain 144 202

Links

Other Homeodomain family TFs
Other Tursiops truncatus TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005911 Calypte anna Aan_R005911 N
Aan_R005912 Calypte anna Aan_R005912 N
Aan_R005913 Calypte anna Aan_R005913 I
Afo_R003312 Aptenodytes forsteri Afo_R003312 N
Afo_R003313 Aptenodytes forsteri Afo_R003313 N
Afo_R003314 Aptenodytes forsteri Afo_R003314 I
Alligator_sinensis_CCG011591.1 Alligator sinensis Alligator_sinensis_CCG011591.1 I
Alligator_sinensis_CCG011592.1 Alligator sinensis Alligator_sinensis_CCG011592.1 N
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N
Brh_R011661 Buceros rhinoceros Brh_R011661 N
Brh_R011662 Buceros rhinoceros Brh_R011662 N
Brh_R011663 Buceros rhinoceros Brh_R011663 I
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N
ENSAPLG00000007962 Anas platyrhynchos ENSAPLG00000007962 N
ENSAPLG00000007967 Anas platyrhynchos ENSAPLG00000007967 I
ENSFALG00000009558 Ficedula albicollis ENSFALG00000009558 N
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N
ENSGALG00000027002 Gallus gallus ENSGALG00000027002 N
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N
ENSMEUG00000013913 Macropus eugenii ENSMEUG00000013913 I
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N
ENSMGAG00000002000 Meleagris gallopavo ENSMGAG00000002000 N
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N
ENSPSIG00000004046 Pelodiscus sinensis ENSPSIG00000004046 N
ENSPSIG00000004058 Pelodiscus sinensis ENSPSIG00000004058 N
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N
ENSPSIG00000014816 Pelodiscus sinensis ENSPSIG00000014816 N
ENSSHAG00000014397 Sarcophilus harrisii ENSSHAG00000014397 I
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N
ENSTGUG00000002877 Taeniopygia guttata ENSTGUG00000002877 N
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N
Gfo_R009738 Geospiza fortis Gfo_R009738 N
Gfo_R009739 Geospiza fortis Gfo_R009739 N
her12 Danio rerio ENSDARG00000032963 N
HES5 Monodelphis domestica ENSMODG00000008212 I
HES5 Meleagris gallopavo ENSMGAG00000002009 I
HES5 Gallus gallus ENSGALG00000001141 I
hes8 Xenopus tropicalis XB-GENE-5952810 N
Pvit_15590 Pogona vitticeps Pvit_15590 N
Pvit_15591 Pogona vitticeps Pvit_15591 N
Tal_R007853 Tyto alba Tal_R007853 N
Tal_R007854 Tyto alba Tal_R007854 N
Tal_R007855 Tyto alba Tal_R007855 I