BLH3 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.2__1821__AT1G75410.1 T218456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.778 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.634 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.610 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.610 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.610 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.610 0.408
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.601 0.429
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.601 0.408
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.600 0.388
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1821__AT1G75410.1 Homeodomain 355 406

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

1212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004396.1 Alligator sinensis Alligator_sinensis_CCG004396.1 N 0.000
Brh_R011240 Buceros rhinoceros Brh_R011240 N 0.000
Cmyd_10004225 Chelonia mydas Cmyd_10004225 N 0.000
ENSAMEG00000017562 Ailuropoda melanoleuca ENSAMEG00000017562 N 0.000
ENSAPLG00000007731 Anas platyrhynchos ENSAPLG00000007731 N 0.000
ENSCSAG00000013610 Chlorocebus sabaeus ENSCSAG00000013610 N 0.000
ENSFALG00000002807 Ficedula albicollis ENSFALG00000002807 N 0.000
ENSGALG00000002305 Gallus gallus ENSGALG00000002305 N 0.000
ENSGMOG00000002344 Gadus morhua ENSGMOG00000002344 N 0.000
ENSNLEG00000018056 Nomascus leucogenys ENSNLEG00000018056 N 0.000
ENSOARG00000015070 Ovis aries ENSOARG00000015070 N 0.000
ENSONIG00000010729 Oreochromis niloticus ENSONIG00000010729 N 0.000
ENSP00000356375 Macaca fascicularis ENSP00000356375 N 0.000
ENSP00000356375-D1 Bos grunniens ENSP00000356375-D1 N 0.000
ENSPFOG00000006537 Poecilia formosa ENSPFOG00000006537 N 0.000
ENSPPYG00000000388 Pongo abelii ENSPPYG00000000388 N 0.000
ENSXMAG00000004794 Xiphophorus maculatus ENSXMAG00000004794 N 0.000
Gfo_R006641 Geospiza fortis Gfo_R006641 N 0.000
Myotis_brandtii_ZBTB41_10008236 Myotis brandtii Myotis_brandtii_ZBTB41_10008236 N 0.000
Tal_R010443 Tyto alba Tal_R010443 N 0.000
zbtb41 Takifugu rubripes ENSTRUG00000009203 N 0.000
zbtb41 Tetraodon nigroviridis ENSTNIG00000007805 N 0.000
ZBTB41 Tursiops truncatus ENSTTRG00000008689 N 0.000
ZBTB41 Vicugna pacos ENSVPAG00000006551 N 0.000
zbtb41 Xenopus tropicalis XB-GENE-877334 N 0.000
ZBTB41 Anolis carolinensis ENSACAG00000009459 N 0.000
ZBTB41 Taeniopygia guttata ENSTGUG00000004282 N 0.000
Zbtb41 Rattus norvegicus ENSRNOG00000011137 N 0.000
ZBTB41 Pan troglodytes ENSPTRG00000001808 N 0.000
ZBTB41 Otolemur garnettii ENSOGAG00000012893 N 0.000
ZBTB41 Oryctolagus cuniculus ENSOCUG00000014765 N 0.000
Zbtb41 Mus musculus ENSMUSG00000033964 N 0.000
ZBTB41 Monodelphis domestica ENSMODG00000012684 N 0.000
ZBTB41 Myotis lucifugus ENSMLUG00000016964 N 0.000
ZBTB41 Loxodonta africana ENSLAFG00000012902 N 0.000
ZBTB41 Gorilla gorilla ENSGGOG00000004843 N 0.000
zbtb41 Gasterosteus aculeatus ENSGACG00000016102 N 0.000
ZBTB41 Homo sapiens ENSG00000177888 N 0.000
ZBTB41 Callithrix jacchus ENSCJAG00000004794 N 0.000
ZBTB41 Canis familiaris ENSCAFG00000011381 N 0.000
ZBTB41 Bos taurus ENSBTAG00000002291 N 0.000