fgenesh2_kg.3__1989__AT3G18010.1 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.3__1989__AT3G18010.1 T218459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.740 0.702
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.740 0.702
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.623 0.474
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.623 0.474
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.623 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__1989__AT3G18010.1 Homeodomain 73 134

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

579 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB33538 Xenopus laevis AAB33538 I 0.000
AAB33539 Xenopus laevis AAB33539 I 0.000
Aan_R001943 Calypte anna Aan_R001943 I 0.000
Aan_R015136 Calypte anna Aan_R015136 I 0.000
Afo_R004166 Aptenodytes forsteri Afo_R004166 I 0.000
Afo_R015892 Aptenodytes forsteri Afo_R015892 I 0.000
Alligator_sinensis_CCG009925.1 Alligator sinensis Alligator_sinensis_CCG009925.1 I 0.000
Alligator_sinensis_CCG019955.1 Alligator sinensis Alligator_sinensis_CCG019955.1 I 0.000
Brh_R012299 Buceros rhinoceros Brh_R012299 I 0.000
Brh_R012869 Buceros rhinoceros Brh_R012869 I 0.000
CapteG228062 Capitella teleta CapteG228062 I 0.000
CGI_10012373 Crassostrea gigas CGI_10012373 I 0.000
Cmyd_10020356 Chelonia mydas Cmyd_10020356 I 0.000
ENSACAG00000000428 Anolis carolinensis ENSACAG00000000428 I 0.000
ENSAMEG00000004645 Ailuropoda melanoleuca ENSAMEG00000004645 I 0.000
ENSAMEG00000012466 Ailuropoda melanoleuca ENSAMEG00000012466 I 0.000
ENSAMXG00000002648 Astyanax mexicanus ENSAMXG00000002648 I 0.000
ENSAMXG00000010221 Astyanax mexicanus ENSAMXG00000010221 I 0.000
ENSAPLG00000005603 Anas platyrhynchos ENSAPLG00000005603 I 0.000
ENSAPLG00000014438 Anas platyrhynchos ENSAPLG00000014438 I 0.000
ENSCHOG00000004467 Choloepus hoffmanni ENSCHOG00000004467 I 0.000
ENSCSAG00000011244 Chlorocebus sabaeus ENSCSAG00000011244 I 0.000
ENSCSAG00000017427 Chlorocebus sabaeus ENSCSAG00000017427 I 0.000
ENSCSAG00000019556 Chlorocebus sabaeus ENSCSAG00000019556 I 0.000
ENSFALG00000003322 Ficedula albicollis ENSFALG00000003322 I 0.000
ENSFALG00000006994 Ficedula albicollis ENSFALG00000006994 I 0.000
ENSGALG00000016823 Gallus gallus ENSGALG00000016823 I 0.000
ENSGGOG00000025466 Gorilla gorilla ENSGGOG00000025466 I 0.000
ENSGMOG00000011559 Gadus morhua ENSGMOG00000011559 I 0.000
ENSLACG00000006246 Latimeria chalumnae ENSLACG00000006246 I 0.000
ENSLACG00000011116 Latimeria chalumnae ENSLACG00000011116 I 0.000
ENSLOCG00000008008 Lepisosteus oculatus ENSLOCG00000008008 I 0.000
ENSLOCG00000009902 Lepisosteus oculatus ENSLOCG00000009902 I 0.000
ENSMEUG00000003211 Macropus eugenii ENSMEUG00000003211 I 0.000
ENSMEUG00000008570 Macropus eugenii ENSMEUG00000008570 I 0.000
ENSMGAG00000014844 Meleagris gallopavo ENSMGAG00000014844 I 0.000
ENSMODG00000003737 Monodelphis domestica ENSMODG00000003737 I 0.000
ENSMPUG00000009700 Mustela putorius furo ENSMPUG00000009700 I 0.000
ENSMPUG00000012159 Mustela putorius furo ENSMPUG00000012159 I 0.000
ENSNLEG00000000849 Nomascus leucogenys ENSNLEG00000000849 I 0.000
ENSOANG00000015627 Ornithorhynchus anatinus ENSOANG00000015627 I 0.000
ENSOARG00000006450 Ovis aries ENSOARG00000006450 I 0.000
ENSOPRG00000006903 Ochotona princeps ENSOPRG00000006903 I 0.000
ENSP00000364519 Macaca fascicularis ENSP00000364519 I 0.000
ENSP00000364519-D1 Bos grunniens ENSP00000364519-D1 I 0.000
ENSP00000420616 Macaca fascicularis ENSP00000420616 I 0.000
ENSP00000420616-D1 Bos grunniens ENSP00000420616-D1 I 0.000
ENSPANG00000003362 Papio anubis ENSPANG00000003362 I 0.000
ENSPANG00000005825 Papio anubis ENSPANG00000005825 I 0.000
ENSPANG00000007195 Papio anubis ENSPANG00000007195 I 0.000
ENSPCAG00000000694 Procavia capensis ENSPCAG00000000694 I 0.000
ENSPPYG00000014170 Pongo abelii ENSPPYG00000014170 I 0.000
ENSPPYG00000020233 Pongo abelii ENSPPYG00000020233 I 0.000
ENSPPYG00000025889 Pongo abelii ENSPPYG00000025889 I 0.000
ENSPSIG00000007116 Pelodiscus sinensis ENSPSIG00000007116 I 0.000
ENSPSIG00000007519 Pelodiscus sinensis ENSPSIG00000007519 I 0.000
ENSSHAG00000015145 Sarcophilus harrisii ENSSHAG00000015145 I 0.000
ENSSHAG00000016738 Sarcophilus harrisii ENSSHAG00000016738 I 0.000
ENSSSCG00000026809 Sus scrofa ENSSSCG00000026809 I 0.000
ENSSTOG00000002592 Ictidomys tridecemlineatus ENSSTOG00000002592 I 0.000
ENSSTOG00000013241 Ictidomys tridecemlineatus ENSSTOG00000013241 I 0.000
ENSTGUG00000008450 Taeniopygia guttata ENSTGUG00000008450 I 0.000
ENSTGUG00000009272 Taeniopygia guttata ENSTGUG00000009272 I 0.000
ENSTSYG00000009267 Tarsius syrichta ENSTSYG00000009267 I 0.000
e_gw.33.11.1 Branchiostoma floridae e_gw.33.11.1 I 0.000
e_gw.33.15.1 Branchiostoma floridae e_gw.33.15.1 I 0.000
Gfo_R005557 Geospiza fortis Gfo_R005557 I 0.000
Gfo_R008913 Geospiza fortis Gfo_R008913 I 0.000
Myotis_brandtii_TFDP1_10005235 Myotis brandtii Myotis_brandtii_TFDP1_10005235 I 0.000
Myotis_brandtii_TFDP2_10028256 Myotis brandtii Myotis_brandtii_TFDP2_10028256 I 0.000
NEMVEDRAFT_v1g115110 Nematostella vectensis NEMVEDRAFT_v1g115110 I 0.000
Ogr00419 Ophisaurus gracilis Ogr00419 I 0.000
Ogr14121 Ophisaurus gracilis Ogr14121 I 0.000
Pvit_02579 Pogona vitticeps Pvit_02579 I 0.000
Pvit_13706 Pogona vitticeps Pvit_13706 I 0.000
SMAR015689 Strigamia maritima SMAR015689 I 0.000
Tal_R006432 Tyto alba Tal_R006432 I 0.000
TFDP1 Canis familiaris ENSCAFG00000006384 I 0.000
TFDP1 Cavia porcellus ENSCPOG00000013486 I 0.000
TFDP1 Dasypus novemcinctus ENSDNOG00000049735 I 0.000
Tfdp1 Dipodomys ordii ENSDORG00000001657 I 0.000
TFDP1 Equus caballus ENSECAG00000013054 I 0.000
TFDP1 Felis catus ENSFCAG00000005399 I 0.000
TFDP1 Homo sapiens ENSG00000198176 D 0.000
TFDP1 Gorilla gorilla ENSGGOG00000004908 I 0.000
TFDP1 Loxodonta africana ENSLAFG00000007927 I 0.000
TFDP1 Myotis lucifugus ENSMLUG00000012165 I 0.000
TFDP1 Macaca mulatta ENSMMUG00000007423 I 0.000
Tfdp1 Mus musculus ENSMUSG00000038482 I 0.000
TFDP1 Oryctolagus cuniculus ENSOCUG00000006771 I 0.000
TFDP1 Otolemur garnettii ENSOGAG00000003532 I 0.000
TFDP1 Pan troglodytes ENSPTRG00000042403 I 0.000
TFDP1 Pteropus vampyrus ENSPVAG00000013413 I 0.000
Tfdp1 Rattus norvegicus ENSRNOG00000019222 I 0.000
TFDP1 Sus scrofa ENSSSCG00000009560 I 0.000
tfdp1 Xenopus tropicalis XB-GENE-1219073 I 0.000
tfdp1.L Xenopus laevis XB-GENE-1219082 I 0.000
tfdp1.S Xenopus laevis XB-GENE-6253882 I 0.000
tfdp1a Danio rerio ENSDARG00000019293 I 0.000
tfdp1a Gasterosteus aculeatus ENSGACG00000003108 I 0.000
tfdp1a Oryzias latipes ENSORLG00000012628 I 0.000
TFDP2 Anolis carolinensis ENSACAG00000005086 I 0.000
TFDP2 Bos taurus ENSBTAG00000006222 I 0.000
TFDP2 Canis familiaris ENSCAFG00000007742 I 0.000
TFDP2 Choloepus hoffmanni ENSCHOG00000010774 I 0.000
TFDP2 Callithrix jacchus ENSCJAG00000001950 I 0.000
TFDP2 Cavia porcellus ENSCPOG00000013203 I 0.000
tfdp2 Danio rerio ENSDARG00000042835 I 0.000
TFDP2 Dasypus novemcinctus ENSDNOG00000016968 I 0.000
TFDP2 Equus caballus ENSECAG00000021725 I 0.000
TFDP2 Felis catus ENSFCAG00000003086 I 0.000
TFDP2 Homo sapiens ENSG00000114126 I 0.000
TFDP2 Gallus gallus ENSGALG00000025759 I 0.000
TFDP2 Gorilla gorilla ENSGGOG00000007878 I 0.000
TFDP2 Loxodonta africana ENSLAFG00000010557 I 0.000
TFDP2 Meleagris gallopavo ENSMGAG00000006194 I 0.000
TFDP2 Microcebus murinus ENSMICG00000001576 I 0.000
TFDP2 Myotis lucifugus ENSMLUG00000014707 I 0.000
TFDP2 Macaca mulatta ENSMMUG00000011134 I 0.000
TFDP2 Monodelphis domestica ENSMODG00000021234 I 0.000
Tfdp2 Mus musculus ENSMUSG00000032411 I 0.000
TFDP2 Ornithorhynchus anatinus ENSOANG00000000434 I 0.000
TFDP2 Oryctolagus cuniculus ENSOCUG00000016458 I 0.000
TFDP2 Otolemur garnettii ENSOGAG00000000168 I 0.000
TFDP2 Procavia capensis ENSPCAG00000012988 I 0.000
TFDP2 Pan troglodytes ENSPTRG00000015479 I 0.000
TFDP2 Pteropus vampyrus ENSPVAG00000003327 I 0.000
Tfdp2 Rattus norvegicus ENSRNOG00000011241 I 0.000
TFDP2 Tursiops truncatus ENSTTRG00000012044 I 0.000
TFDP2 Vicugna pacos ENSVPAG00000004687 I 0.000
tfdp2.S Xenopus laevis XB-GENE-1000265 I 0.000
TriadG32839 Trichoplax adhaerens TriadG32839 I 0.000
XP_002169779.1 Hydra magnipapillata XP_002169779.1 I 0.000
XP_002933405 Xenopus tropicalis XP_002933405 I 0.000