GSMUA_Achr4G29470_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr4G29470_001 T219161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.758 0.737
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.758 0.737
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.745 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P29470_001 Homeodomain 73 134

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29669.m000805 Ricinus communis 29669.m000805 I 0.601
29830.m001452 Ricinus communis 29830.m001452 I 0.758
30170.m014389 Ricinus communis 30170.m014389 I 0.688
AMTR_s00029p00225270 Amborella trichopoda AMTR_s00029p00225270 I 0.602
AMTR_s00044p00155390 Amborella trichopoda AMTR_s00044p00155390 I 0.756
Aquca_004_00311 Aquilegia coerulea Aquca_004_00311 I 0.605
Aquca_007_00901 Aquilegia coerulea Aquca_007_00901 I 0.725
Aquca_015_00333 Aquilegia coerulea Aquca_015_00333 I 0.685
BGIOSGA000469 Oryza indica BGIOSGA000469 I 0.625
BGIOSGA004695 Oryza indica BGIOSGA004695 I 0.758
Bo09314s010 Brassica oleracea Bo09314s010 I 0.701
Bo1g006370 Brassica oleracea Bo1g006370 I 0.758
Bo2g007050 Brassica oleracea Bo2g007050 I 0.613
Bo3g155580 Brassica oleracea Bo3g155580 I 0.720
Bo5g030590 Brassica oleracea Bo5g030590 I 0.699
Bo7g061410 Brassica oleracea Bo7g061410 I 0.701
Bo7g117480 Brassica oleracea Bo7g117480 I 0.727
Bo9g176920 Brassica oleracea Bo9g176920 I 0.613
Bostr.13129s0396 Boechera stricta Bostr.13129s0396 I 0.613
Bostr.3717s0001 Boechera stricta Bostr.3717s0001 I 0.699
Bostr.7128s0661 Boechera stricta Bostr.7128s0661 I 0.699
Bostr.7867s1413 Boechera stricta Bostr.7867s1413 I 0.758
Bra009132 Brassica rapa Bra009132 I 0.613
Bra010531 Brassica rapa Bra010531 I 0.720
Bra011623 Brassica rapa Bra011623 I 0.758
Bra017720 Brassica rapa Bra017720 I 0.725
Bra025839 Brassica rapa Bra025839 I 0.699
Bra028749 Brassica rapa Bra028749 I 0.613
BRADI2G53390 Brachypodium distachyon BRADI2G53390 I 0.758
BRADI2G54590 Brachypodium distachyon BRADI2G54590 I 0.613
BRADI2G55270 Brachypodium distachyon BRADI2G55270 I 0.625
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.758
Cagra.5131s0005 Capsella grandiflora Cagra.5131s0005 I 0.613
Cagra.6160s0025 Capsella grandiflora Cagra.6160s0025 I 0.699
Cagra.6160s0026 Capsella grandiflora Cagra.6160s0026 I 0.699
Carubv10003830m.g Capsella rubella Carubv10003830m.g I 0.613
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.758
Carubv10010349m.g Capsella rubella Carubv10010349m.g I 0.699
Carubv10012447m.g Capsella rubella Carubv10012447m.g I 0.699
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.758
cassava26880.m1 Manihot esculenta cassava26880.m1 I 0.601
cassava39214.m1 Manihot esculenta cassava39214.m1 I 0.686
cassava4109.m1 Manihot esculenta cassava4109.m1 I 0.601
Ca_04823 Cicer arietinum Ca_04823 I 0.725
Ca_10316 Cicer arietinum Ca_10316 I 0.601
Ca_18623 Cicer arietinum Ca_18623 I 0.725
Ca_19383 Cicer arietinum Ca_19383 I 0.715
Ca_19386 Cicer arietinum Ca_19386 I 0.715
chr1.CM0113.620.nc Lotus japonicus chr1.CM0113.620.nc I 0.757
chr5.CM0180.70.nc Lotus japonicus chr5.CM0180.70.nc I 0.721
Ciclev10002354m.g Citrus clementina Ciclev10002354m.g I 0.730
Ciclev10026199m.g Citrus clementina Ciclev10026199m.g I 0.758
Ciclev10033868m.g Citrus clementina Ciclev10033868m.g I 0.601
Cla006686 Citrullus lanatus Cla006686 I 0.605
Cla009089 Citrullus lanatus Cla009089 I 0.727
Cla023819 Citrullus lanatus Cla023819 I 0.747
Cucsa.136500 Cucumis sativus Cucsa.136500 I 0.605
Cucsa.272210 Cucumis sativus Cucsa.272210 I 0.747
Cucsa.323040 Cucumis sativus Cucsa.323040 I 0.727
estExt_fgenesh1_pg.C_90244 Micromonas pusilla estExt_fgenesh1_pg.C_90244 I 0.638
Eucgr.G03036 Eucalyptus grandis Eucgr.G03036 I 0.601
Eucgr.I02222 Eucalyptus grandis Eucgr.I02222 I 0.758
EuGene.0600010372 Micromonas sp RCC299 EuGene.0600010372 I 0.675
evm.TU.supercontig_19.201 Carica papaya evm.TU.supercontig_19.201 I 0.601
evm.TU.supercontig_26.173 Carica papaya evm.TU.supercontig_26.173 I 0.694
evm.TU.supercontig_6.368 Carica papaya evm.TU.supercontig_6.368 I 0.758
F775_11596 Aegilops tauschii F775_11596 I 0.758
F775_30123 Aegilops tauschii F775_30123 I 0.625
fgenesh1_pg.scaffold_217000007 Physcomitrella patens fgenesh1_pg.scaffold_217000007 I 0.683
gene13035-v1.0-hybrid Fragaria vesca gene13035-v1.0-hybrid I 0.758
gene20491-v1.0-hybrid Fragaria vesca gene20491-v1.0-hybrid I 0.761
gene20925-v1.0-hybrid Fragaria vesca gene20925-v1.0-hybrid I 0.601
gene32456-v1.0-hybrid Fragaria vesca gene32456-v1.0-hybrid I 0.603
GLYMA02G10410 Glycine max GLYMA02G10410 I 0.731
GLYMA02G42200 Glycine max GLYMA02G42200 I 0.601
GLYMA04G01830 Glycine max GLYMA04G01830 I 0.758
GLYMA06G01940 Glycine max GLYMA06G01940 I 0.758
GLYMA10G43580 Glycine max GLYMA10G43580 I 0.727
GLYMA11G34990 Glycine max GLYMA11G34990 I 0.601
GLYMA18G03350 Glycine max GLYMA18G03350 I 0.601
GLYMA18G52491 Glycine max GLYMA18G52491 I 0.731
GLYMA20G23220 Glycine max GLYMA20G23220 I 0.727
Gorai.001G199200 Gossypium raimondii Gorai.001G199200 I 0.758
Gorai.003G002200 Gossypium raimondii Gorai.003G002200 I 0.760
Gorai.004G038300 Gossypium raimondii Gorai.004G038300 I 0.753
Gorai.007G372000 Gossypium raimondii Gorai.007G372000 I 0.717
Gorai.011G283000 Gossypium raimondii Gorai.011G283000 I 0.601
GRMZM2G038252 Zea mays GRMZM2G038252 D 0.745
GRMZM2G069274 Zea mays GRMZM2G069274 I 0.745
GRMZM2G108933 Zea mays GRMZM2G108933 I 0.630
GRMZM2G116063 Zea mays GRMZM2G116063 I 0.625
GRMZM2G339751 Zea mays GRMZM2G339751 I 0.622
GRMZM2G478396 Zea mays GRMZM2G478396 I 0.621
GRMZM5G805026 Zea mays GRMZM5G805026 I 0.745
GSMUA_Achr10G07260_001 Musa acuminata GSMUA_Achr10G07260_001 I 0.714
GSMUA_Achr1G17980_001 Musa acuminata GSMUA_Achr1G17980_001 I 0.758
GSMUA_Achr3G09460_001 Musa acuminata GSMUA_Achr3G09460_001 I 0.602
GSMUA_Achr3G14840_001 Musa acuminata GSMUA_Achr3G14840_001 I 0.687
GSMUA_Achr4G25530_001 Musa acuminata GSMUA_Achr4G25530_001 I 0.728
GSMUA_Achr5G11080_001 Musa acuminata GSMUA_Achr5G11080_001 I 0.758
GSMUA_Achr7G04050_001 Musa acuminata GSMUA_Achr7G04050_001 I 0.730
GSMUA_Achr7G14860_001 Musa acuminata GSMUA_Achr7G14860_001 I 0.605
GSMUA_AchrUn_randomG18610_001 Musa acuminata GSMUA_AchrUn_randomG18610_001 I 0.758
gw1.224.39.1 Physcomitrella patens gw1.224.39.1 I 0.740
gw1.29.10.1 Physcomitrella patens gw1.29.10.1 I 0.740
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.758
HB-4 Arabidopsis lyrata scaffold_700564.1 I 0.756
LjSGA_103126.1 Lotus japonicus LjSGA_103126.1 I 0.601
LjT41B11.90.nd Lotus japonicus LjT41B11.90.nd I 0.719
LPERR01G30370 Leersia perrieri LPERR01G30370 I 0.758
LPERR01G32330 Leersia perrieri LPERR01G32330 I 0.625
Lus10016026.g Linum usitatissimum Lus10016026.g I 0.705
Lus10023561.g Linum usitatissimum Lus10023561.g I 0.715
Lus10028271.g Linum usitatissimum Lus10028271.g I 0.601
Lus10038480.g Linum usitatissimum Lus10038480.g I 0.626
Lus10040219.g Linum usitatissimum Lus10040219.g I 0.605
Lus10040447.g Linum usitatissimum Lus10040447.g I 0.727
MDP0000213910 Malus domestica MDP0000213910 I 0.601
MDP0000224466 Malus domestica MDP0000224466 I 0.722
MDP0000304650 Malus domestica MDP0000304650 I 0.762
MDP0000316517 Malus domestica MDP0000316517 I 0.758
MDP0000600720 Malus domestica MDP0000600720 I 0.601
MDP0000851699 Malus domestica MDP0000851699 I 0.722
mgf006573m Mimulus guttatus mgf006573m I 0.727
mgf008378m Mimulus guttatus mgf008378m I 0.601
mgf023746m Mimulus guttatus mgf023746m I 0.617
mgf024314m Mimulus guttatus mgf024314m N 0.611
MLOC_56124 Hordeum vulgare MLOC_56124 I 0.758
MLOC_74758 Hordeum vulgare MLOC_74758 I 0.625
MTR_1g115315 Medicago truncatula MTR_1g115315 I 0.725
MTR_3g115620 Medicago truncatula MTR_3g115620 I 0.727
MTR_5g081990 Medicago truncatula MTR_5g081990 I 0.601
MTR_7g023810 Medicago truncatula MTR_7g023810 I 0.693
OB01G44030 Oryza brachyantha OB01G44030 I 0.758
OB01G46390 Oryza brachyantha OB01G46390 I 0.625
OBART01G35170 Oryza barthii OBART01G35170 I 0.758
OBART01G37660 Oryza barthii OBART01G37660 I 0.625
OGLUM01G41580 Oryza glumaepatula OGLUM01G41580 I 0.625
OLONG_007155 Oryza longistaminata OLONG_007155 I 0.625
OLONG_016784 Oryza longistaminata OLONG_016784 I 0.758
OMERI01G32310 Oryza meridionalis OMERI01G32310 I 0.758
OMERI01G34630 Oryza meridionalis OMERI01G34630 I 0.625
ONIVA01G14610 Oryza nivara ONIVA01G14610 I 0.625
ONIVA01G40180 Oryza nivara ONIVA01G40180 I 0.758
OPUNC01G34140 Oryza punctata OPUNC01G34140 I 0.758
OPUNC01G36520 Oryza punctata OPUNC01G36520 I 0.625
orange1.1g022516m.g Citrus sinensis orange1.1g022516m.g I 0.758
orange1.1g026809m.g Citrus sinensis orange1.1g026809m.g I 0.730
orange1.1g036802m.g Citrus sinensis orange1.1g036802m.g I 0.601
ORGLA01G0290300 Oryza glaberrima ORGLA01G0290300 I 0.758
ORGLA01G0314800 Oryza glaberrima ORGLA01G0314800 I 0.625
ORUFI01G38500 Oryza rufipogon ORUFI01G38500 I 0.758
ORUFI01G41010 Oryza rufipogon ORUFI01G41010 I 0.625
Pavir.Ea03245 Panicum virgatum Pavir.Ea03245 I 0.745
Pavir.Ea03339 Panicum virgatum Pavir.Ea03339 I 0.630
Pavir.Ea03790 Panicum virgatum Pavir.Ea03790 I 0.625
Pavir.Eb03552 Panicum virgatum Pavir.Eb03552 I 0.745
Pavir.Eb03715 Panicum virgatum Pavir.Eb03715 I 0.629
Pavir.J34036 Panicum virgatum Pavir.J34036 I 0.625
PDK_20s1363982g001 Phoenix dactylifera PDK_20s1363982g001 I 0.633
PDK_20s1408301g001 Phoenix dactylifera PDK_20s1408301g001 I 0.754
PGSC0003DMG400001565 Solanum tuberosum PGSC0003DMG400001565 I 0.727
PGSC0003DMG400020731 Solanum tuberosum PGSC0003DMG400020731 I 0.605
PK07880.1 Cannabis sativa PK07880.1 I 0.747
PK12498.1 Cannabis sativa PK12498.1 I 0.601
PK14252.1 Cannabis sativa PK14252.1 I 0.714
Pm018890 Prunus mume Pm018890 I 0.601
Pm022951 Prunus mume Pm022951 I 0.758
Pm026793 Prunus mume Pm026793 I 0.758
POPTR_0002s00980 Populus trichocarpa POPTR_0002s00980 I 0.712
POPTR_0005s27410 Populus trichocarpa POPTR_0005s27410 I 0.712
POPTR_0010s19950 Populus trichocarpa POPTR_0010s19950 I 0.601
PRUPE_ppa011225mg Prunus persica PRUPE_ppa011225mg I 0.758
PRUPE_ppa020183mg Prunus persica PRUPE_ppa020183mg I 0.601
PRUPE_ppa021400mg Prunus persica PRUPE_ppa021400mg I 0.758
SapurV1A.0016s0590 Salix purpurea SapurV1A.0016s0590 I 0.712
SapurV1A.0061s0020 Salix purpurea SapurV1A.0061s0020 I 0.605
SapurV1A.0266s0300 Salix purpurea SapurV1A.0266s0300 I 0.712
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.758
Sb03g038080 Sorghum bicolor Sb03g038080 I 0.745
Sb03g039380 Sorghum bicolor Sb03g039380 I 0.624
Sb03g040210 Sorghum bicolor Sb03g040210 I 0.625
SELMODRAFT_115439 Selaginella moellendorffii SELMODRAFT_115439 I 0.624
SELMODRAFT_123325 Selaginella moellendorffii SELMODRAFT_123325 I 0.624
SELMODRAFT_404178 Selaginella moellendorffii SELMODRAFT_404178 I 0.703
SELMODRAFT_407157 Selaginella moellendorffii SELMODRAFT_407157 I 0.703
SELMODRAFT_438787 Selaginella moellendorffii SELMODRAFT_438787 I 0.745
SELMODRAFT_451353 Selaginella moellendorffii SELMODRAFT_451353 I 0.633
SELMODRAFT_451355 Selaginella moellendorffii SELMODRAFT_451355 I 0.745
SELMODRAFT_84885 Selaginella moellendorffii SELMODRAFT_84885 I 0.631
Si002508m.g Setaria italica Si002508m.g I 0.745
Si002900m.g Setaria italica Si002900m.g I 0.625
Solyc02g082670.2 Solanum lycopersicum Solyc02g082670.2 I 0.727
Solyc03g096300.2 Solanum lycopersicum Solyc03g096300.2 I 0.601
TCM_000062 Theobroma cacao TCM_000062 I 0.758
TCM_034409 Theobroma cacao TCM_034409 I 0.750
TCM_042593 Theobroma cacao TCM_042593 I 0.601
Thhalv10008824m.g Eutrema salsugineum Thhalv10008824m.g I 0.688
Thhalv10009917m.g Eutrema salsugineum Thhalv10009917m.g I 0.687
Thhalv10015842m.g Eutrema salsugineum Thhalv10015842m.g I 0.613
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.756
TRAES3BF057600060CFD_g Triticum aestivum TRAES3BF057600060CFD_g I 0.758
TRAES3BF091200090CFD_g Triticum aestivum TRAES3BF091200090CFD_g I 0.758
TRAES3BF091200100CFD_g Triticum aestivum TRAES3BF091200100CFD_g I 0.758
Traes_3AL_D0053C177 Triticum aestivum Traes_3AL_D0053C177 I 0.758
Traes_3AS_9079D6B71 Triticum aestivum Traes_3AS_9079D6B71 I 0.736
Traes_3DL_6B1815F7D Triticum aestivum Traes_3DL_6B1815F7D I 0.758
Traes_3DS_97BBFFA03 Triticum aestivum Traes_3DS_97BBFFA03 I 0.758
Traes_5BS_439DB52FE Triticum aestivum Traes_5BS_439DB52FE I 0.634
Traes_5DS_903A67B97 Triticum aestivum Traes_5DS_903A67B97 I 0.634
TRIUR3_23636 Triticum urartu TRIUR3_23636 I 0.758
TRIUR3_26391 Triticum urartu TRIUR3_26391 I 0.625
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.747
VIT_04s0044g00160 Vitis vinifera VIT_04s0044g00160 I 0.690
VIT_13s0019g03460 Vitis vinifera VIT_13s0019g03460 I 0.601
VIT_18s0122g01140 Vitis vinifera VIT_18s0122g01140 I 0.727
WOX10 Arabidopsis thaliana AT1G20710 I 0.683
WOX10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001761 I 0.699
WOX13 Arabidopsis thaliana AT4G35550 D 0.758
WOX14 Arabidopsis thaliana AT1G20700 I 0.699
WOX14 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001881 I 0.699
WOX7 Arabidopsis thaliana AT5G05770 I 0.613
WOX7 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000438 I 0.613
WOX8 Oryza sativa OS01G0818400 I 0.758
WOX9 Oryza sativa OS01G0854500 I 0.625