MESCA007051 (Megaselia scalaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MESCA007051 T220564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.704 0.442
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.704 0.442
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.704 0.442
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.680 0.372
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.680 0.372
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.680 0.372
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.680 0.372
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.680 0.372
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.680 0.372
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.680 0.372
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.680 0.372
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.680 0.372
lab
M03797_2.00 		Drosophila melanogaster
NTAATTAS
STAATTAN		 SELEX
Nitta et al.(2015)
lab_1 		0.326 1.000
lab
M06493_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0230.1 		0.326 1.000
lab
M06260_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522 		0.326 1.000
lab
M06261_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522 		0.326 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MESCA007051-PA Homeodomain 71 113

Links

Other Homeodomain family TFs
Other Megaselia scalaris TFs

1237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002403 Calypte anna Aan_R002403 N
Alligator_sinensis_CCG001820.1 Alligator sinensis Alligator_sinensis_CCG001820.1 N
Cmyd_10005054 Chelonia mydas Cmyd_10005054 N
ENSAMEG00000012036 Ailuropoda melanoleuca ENSAMEG00000012036 N
ENSAMXG00000001813 Astyanax mexicanus ENSAMXG00000001813 N
ENSAMXG00000014687 Astyanax mexicanus ENSAMXG00000014687 N
ENSAPLG00000011761 Anas platyrhynchos ENSAPLG00000011761 N
ENSBTAP00000008766-D1 Bos grunniens ENSBTAP00000008766-D1 N
ENSCSAG00000001881 Chlorocebus sabaeus ENSCSAG00000001881 N
ENSGALG00000029154 Gallus gallus ENSGALG00000029154 N
ENSGMOG00000013793 Gadus morhua ENSGMOG00000013793 N
ENSLACG00000013888 Latimeria chalumnae ENSLACG00000013888 N
ENSLOCG00000008705 Lepisosteus oculatus ENSLOCG00000008705 N
ENSMEUG00000007551 Macropus eugenii ENSMEUG00000007551 N
ENSMGAG00000017205 Meleagris gallopavo ENSMGAG00000017205 N
ENSMPUG00000008136 Mustela putorius furo ENSMPUG00000008136 N
ENSNLEG00000010649 Nomascus leucogenys ENSNLEG00000010649 N
ENSOARG00000001486 Ovis aries ENSOARG00000001486 N
ENSONIG00000010369 Oreochromis niloticus ENSONIG00000010369 N
ENSP00000357644 Macaca fascicularis ENSP00000357644 N
ENSPANG00000008972 Papio anubis ENSPANG00000008972 N
ENSPFOG00000008182 Poecilia formosa ENSPFOG00000008182 N
ENSPPYG00000029612 Pongo abelii ENSPPYG00000029612 N
ENSPSIG00000004590 Pelodiscus sinensis ENSPSIG00000004590 N
ENSSHAG00000011064 Sarcophilus harrisii ENSSHAG00000011064 N
ENSSTOG00000005407 Ictidomys tridecemlineatus ENSSTOG00000005407 N
ENSTSYG00000012560 Tarsius syrichta ENSTSYG00000012560 N
ENSXMAG00000010412 Xiphophorus maculatus ENSXMAG00000010412 N
GATAD2B Sorex araneus ENSSARG00000011365 N
Gatad2b Rattus norvegicus ENSRNOG00000015553 N
gatad2b Takifugu rubripes ENSTRUG00000002877 N
GATAD2B Pteropus vampyrus ENSPVAG00000011082 N
GATAD2B Sus scrofa ENSSSCG00000006562 N
GATAD2B Tursiops truncatus ENSTTRG00000014779 N
GATAD2B Pan troglodytes ENSPTRG00000001364 N
gatad2b Tetraodon nigroviridis ENSTNIG00000002290 N
GATAD2B Vicugna pacos ENSVPAG00000010268 N
GATAD2B Anolis carolinensis ENSACAG00000008791 N
GATAD2B Tupaia belangeri ENSTBEG00000015791 N
gatad2b Xenopus tropicalis XB-GENE-5995517 N
GATAD2B Felis catus ENSFCAG00000002751 N
GATAD2B Bos taurus ENSBTAG00000006678 N
GATAD2B Canis familiaris ENSCAFG00000017433 N
GATAD2B Choloepus hoffmanni ENSCHOG00000013411 N
GATAD2B Callithrix jacchus ENSCJAG00000010131 N
GATAD2B Cavia porcellus ENSCPOG00000010326 N
gatad2b Danio rerio ENSDARG00000005834 N
GATAD2B Dasypus novemcinctus ENSDNOG00000048326 N
Gatad2b Dipodomys ordii ENSDORG00000013431 N
GATAD2B Equus caballus ENSECAG00000011357 N
GATAD2B Procavia capensis ENSPCAG00000001797 N
GATAD2B Homo sapiens ENSG00000143614 N
gatad2b Gasterosteus aculeatus ENSGACG00000000510 N
GATAD2B Gorilla gorilla ENSGGOG00000012553 N
GATAD2B Loxodonta africana ENSLAFG00000002667 N
GATAD2B Microcebus murinus ENSMICG00000008874 N
GATAD2B Myotis lucifugus ENSMLUG00000004859 N
GATAD2B Macaca mulatta ENSMMUG00000002696 N
GATAD2B Monodelphis domestica ENSMODG00000017336 N
Gatad2b Mus musculus ENSMUSG00000042390 N
GATAD2B Oryctolagus cuniculus ENSOCUG00000008135 N
GATAD2B Otolemur garnettii ENSOGAG00000004606 N
GATAD2B Ochotona princeps ENSOPRG00000000027 N
gatad2b Oryzias latipes ENSORLG00000010868 N
Gfo_R009850 Geospiza fortis Gfo_R009850 N
Myotis_brandtii_GATAD2B_10031899 Myotis brandtii Myotis_brandtii_GATAD2B_10031899 N
Ogr01497 Ophisaurus gracilis Ogr01497 N
Pvit_02350 Pogona vitticeps Pvit_02350 N