CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g47235
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g47235
T221052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q0N4H7_NEMVE
M02164_2.00
Nematostella vectensis
NNDAYNDNNN
NNNHNRTHNN
PBM
Weirauch et al.(2014)
pTH6472
0.849
0.947
NEMVEDRAFT_v1g114268
M02145_2.00
Nematostella vectensis
WTAATBGRT
AYCVATTAW
PBM
Weirauch et al.(2014)
pTH6514
0.842
0.895
Q0N4H2_NEMVE
M02163_2.00
Nematostella vectensis
TAATYRVT
ABYRATTA
PBM
Weirauch et al.(2014)
pTH6303
0.720
0.579
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO38253
Homeodomain
2
58
KPRRSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQVKIWFQNRRMKRKR
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07740
Capronia coronata
A1O1_07740
N
0.000
A1O3_09951
Capronia epimyces
A1O3_09951
N
0.000
A1O5_05390
Cladophialophora psammophila
A1O5_05390
N
0.000
A1O7_06553
Cladophialophora yegresii
A1O7_06553
N
0.000
A1O9_07673
Exophiala aquamarina
A1O9_07673
N
0.000
CMQ_2112
Grosmannia clavigera
CMQ_2112
N
0.000
F503_07103
Ophiostoma piceae uamh
F503_07103
I
0.000
HMPREF1120_03788
Exophiala dermatitidis
HMPREF1120_03788
N
0.000
HMPREF1541_00734
Cyphellophora europaea
HMPREF1541_00734
N
0.000
PV04_06958
Capronia semiimmersa
PV04_06958
N
0.000
PV05_08276
Exophiala xenobiotica
PV05_08276
N
0.000
PV06_01995
Exophiala oligosperma
PV06_01995
N
0.000
PV07_03069
Cladophialophora immunda
PV07_03069
N
0.000
PV08_02867
Exophiala spinifera
PV08_02867
N
0.000
PV10_08335
Exophiala mesophila
PV10_08335
N
0.000
PV11_06361
Exophiala sideris
PV11_06361
N
0.000
Z517_05580
Fonsecaea pedrosoi
Z517_05580
N
0.000
Z518_05924
Rhinocladiella mackenziei
Z518_05924
N
0.000
Z519_08264
Cladophialophora bantiana
Z519_08264
N
0.000