OB06G10590 (Oryza brachyantha)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OB06G10590 T221258_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.781 0.690
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.664 0.476
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.664 0.476
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.664 0.476
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.664 0.476
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.571
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB06G10590.1 Homeodomain 207 250

Links

Other Homeodomain family TFs
Other Oryza brachyantha TFs

1020 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011917 Calypte anna Aan_R011917 I 0.000
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.000
COCC4DRAFT_69376 Bipolaris maydis COCC4DRAFT_69376 I 0.000
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.000
Eucgr.H02817 Eucalyptus grandis Eucgr.H02817 I 0.000
HESX1 Homo sapiens ENSG00000163666 D 0.000
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.000
MCINX007054 Melitaea cinxia MCINX007054 I 0.000
MCINX008871 Melitaea cinxia MCINX008871 I 0.000
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.000
OMERI08G14040 Oryza meridionalis OMERI08G14040 I 0.000
ONIVA08G19230 Oryza nivara ONIVA08G19230 N 0.000
OPUNC09G10660 Oryza punctata OPUNC09G10660 I 0.000
PGSC0003DMG400021423 Solanum tuberosum PGSC0003DMG400021423 I 0.000
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.000
SNOG_06729 Phaeosphaeria nodorum SNOG_06729 N 0.000
SNOG_06729 Stagonospora nodorum SNOG_06729 N 0.000
TRIUR3_27997 Triticum urartu TRIUR3_27997 N 0.000