ORGLA03G0273900 (Oryza glaberrima)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORGLA03G0273900 T221832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.843 0.755
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0273900.1 Homeodomain 390 441

Links

Other Homeodomain family TFs
Other Oryza glaberrima TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PMAA_095820 Talaromyces marneffei PMAA_095820 N 0.000
PMAA_095820 Penicillium marneffei PMAA_095820 N 0.000
TSTA_000600 Talaromyces stipitatus TSTA_000600 N 0.000
TSTA_002980 Talaromyces stipitatus TSTA_002980 N 0.000
TSTA_003830 Talaromyces stipitatus TSTA_003830 N 0.000
TSTA_008380 Talaromyces stipitatus TSTA_008380 N 0.000
TSTA_009130 Talaromyces stipitatus TSTA_009130 N 0.000
TSTA_009440 Talaromyces stipitatus TSTA_009440 N 0.000
TSTA_009900 Talaromyces stipitatus TSTA_009900 N 0.000
TSTA_022990 Talaromyces stipitatus TSTA_022990 N 0.000
TSTA_024630 Talaromyces stipitatus TSTA_024630 N 0.000
TSTA_025810 Talaromyces stipitatus TSTA_025810 N 0.000
TSTA_029420 Talaromyces stipitatus TSTA_029420 N 0.000
TSTA_035660 Talaromyces stipitatus TSTA_035660 N 0.000
TSTA_035730 Talaromyces stipitatus TSTA_035730 N 0.000
TSTA_050400 Talaromyces stipitatus TSTA_050400 N 0.000
TSTA_050560 Talaromyces stipitatus TSTA_050560 N 0.000
TSTA_052640 Talaromyces stipitatus TSTA_052640 N 0.000
TSTA_059810 Talaromyces stipitatus TSTA_059810 N 0.000
TSTA_069180 Talaromyces stipitatus TSTA_069180 N 0.000
TSTA_080510 Talaromyces stipitatus TSTA_080510 N 0.000
TSTA_086330 Talaromyces stipitatus TSTA_086330 N 0.000
TSTA_088180 Talaromyces stipitatus TSTA_088180 N 0.000
TSTA_093940 Talaromyces stipitatus TSTA_093940 N 0.000
TSTA_096630 Talaromyces stipitatus TSTA_096630 N 0.000
TSTA_097820 Talaromyces stipitatus TSTA_097820 N 0.000
TSTA_097920 Talaromyces stipitatus TSTA_097920 N 0.000
TSTA_098800 Talaromyces stipitatus TSTA_098800 N 0.000
TSTA_103240 Talaromyces stipitatus TSTA_103240 N 0.000
TSTA_106120 Talaromyces stipitatus TSTA_106120 N 0.000
TSTA_107220 Talaromyces stipitatus TSTA_107220 N 0.000
TSTA_109860 Talaromyces stipitatus TSTA_109860 N 0.000
TSTA_112350 Talaromyces stipitatus TSTA_112350 N 0.000
TSTA_112760 Talaromyces stipitatus TSTA_112760 N 0.000
TSTA_125380 Talaromyces stipitatus TSTA_125380 N 0.000
TSTA_125400 Talaromyces stipitatus TSTA_125400 N 0.000