ORGLA06G0063600 (Oryza glaberrima)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORGLA06G0063600 T221852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.831 0.860
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.815 0.825
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.815 0.825
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.809 0.772
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.809 0.772
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.797 0.754
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.797 0.754
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.794 0.754
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.794 0.754
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.779 0.772
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.779 0.772
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.779 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.770 0.667
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.732 0.667
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.732 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0063600.1 Homeodomain 15 72

Links

Other Homeodomain family TFs
Other Oryza glaberrima TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005011 Ailuropoda melanoleuca ENSAMEG00000005011 N
ENSBTAP00000010078-D1 Bos grunniens ENSBTAP00000010078-D1 N
ENSCPOG00000027253 Cavia porcellus ENSCPOG00000027253 N
ENSCSAG00000007968 Chlorocebus sabaeus ENSCSAG00000007968 N
ENSMPUG00000007231 Mustela putorius furo ENSMPUG00000007231 N
ENSOARG00000004095 Ovis aries ENSOARG00000004095 N
ENSP00000377504 Macaca fascicularis ENSP00000377504 N
ENSPANG00000000284 Papio anubis ENSPANG00000000284 N
ENSPPYG00000009508 Pongo abelii ENSPPYG00000009508 N
ENSSTOG00000028879 Ictidomys tridecemlineatus ENSSTOG00000028879 N
Myotis_brandtii_ZNF414_10012537 Myotis brandtii Myotis_brandtii_ZNF414_10012537 N
Zfp414 Mus musculus ENSMUSG00000073423 N
Zfp414 Rattus norvegicus ENSRNOG00000008378 N
ZNF414 Equus caballus ENSECAG00000023401 N
ZNF414 Bos taurus ENSBTAG00000007660 N
ZNF414 Canis familiaris ENSCAFG00000018529 N
ZNF414 Callithrix jacchus ENSCJAG00000010927 N
ZNF414 Tursiops truncatus ENSTTRG00000009785 N
ZNF414 Tupaia belangeri ENSTBEG00000004008 N
ZNF414 Dasypus novemcinctus ENSDNOG00000025224 N
ZNF414 Pteropus vampyrus ENSPVAG00000009654 N
ZNF414 Pan troglodytes ENSPTRG00000010427 N
ZNF414 Gorilla gorilla ENSGGOG00000003514 N
ZNF414 Echinops telfairi ENSETEG00000019716 N
ZNF414 Otolemur garnettii ENSOGAG00000003243 N
ZNF414 Oryctolagus cuniculus ENSOCUG00000027412 N
ZNF414 Felis catus ENSFCAG00000015220 N
ZNF414 Homo sapiens ENSG00000133250 N
ZNF414 Macaca mulatta ENSMMUG00000019918 N
ZNF414 Myotis lucifugus ENSMLUG00000006742 N
ZNF414 Loxodonta africana ENSLAFG00000021907 N