ORUFI12G04260 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI12G04260 T221971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.762 0.765
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.653 0.529
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.653 0.529
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.653 0.529
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.653 0.529
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.602 0.559
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI12G04260.1 Homeodomain 369 402

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

1003 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079170 Acremonium chrysogenum ACRE_079170 N 0.000
BBA_04448 Beauveria bassiana BBA_04448 N 0.000
CFIO01_10935 Colletotrichum fioriniae CFIO01_10935 N 0.000
CH063_07408 Colletotrichum higginsianum CH063_07408 N 0.000
Cob_08103 Colletotrichum orbiculare Cob_08103 N 0.000
CSUB01_03837 Colletotrichum sublineola CSUB01_03837 N 0.000
fgenesh1_pm.sca_1_chr1_3_0000112 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000112 N 0.000
FGRRES_01172 Fusarium graminearum FGRRES_01172 N 0.000
FOXG_00219 Fusarium oxysporum FOXG_00219 N 0.000
FPSE_02603 Fusarium pseudograminearum FPSE_02603 N 0.000
FVEG_01299 Fusarium verticillioides FVEG_01299 N 0.000
GLRG_04054 Colletotrichum graminicola GLRG_04054 N 0.000
MAC_04201 Metarhizium acridum MAC_04201 N 0.000
MAJ_02155 Metarhizium majus MAJ_02155 N 0.000
MANI_024672 Metarhizium anisopliae MANI_024672 N 0.000
MBR_03632 Metarhizium brunneum MBR_03632 N 0.000
MGU_04822 Metarhizium guizhouense MGU_04822 N 0.000
NechaG89979 Fusarium solani NechaG89979 N 0.000
NFIA_003270 Neosartorya fischeri CADNFIAG00000089 N 0.000
OCS_04252 Ophiocordyceps sinensis OCS_04252 N 0.000
S40285_00886 Stachybotrys chlorohalonata S40285_00886 N 0.000
S40288_08147 Stachybotrys chartarum S40288_08147 N 0.000
TRIATDRAFT_221642 Trichoderma atroviride TRIATDRAFT_221642 N 0.000
TRIREDRAFT_78895 Trichoderma reesei TRIREDRAFT_78895 N 0.000
TRIVIDRAFT_35417 Trichoderma virens TRIVIDRAFT_35417 N 0.000
UV8b_5696 Ustilaginoidea virens UV8b_5696 N 0.000
VHEMI06418 Torrubiella hemipterigena VHEMI06418 N 0.000
X797_003689 Metarhizium robertsii X797_003689 N 0.000