BLH4 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 scaffold_400362.1 T223030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.842 0.673
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.531
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_400362.1 Homeodomain 421 472

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

1011 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017202 Ailuropoda melanoleuca ENSAMEG00000017202 N
ENSCSAG00000018864 Chlorocebus sabaeus ENSCSAG00000018864 N
ENSDORG00000001887 Dipodomys ordii ENSDORG00000001887 N
ENSMPUG00000004675 Mustela putorius furo ENSMPUG00000004675 N
ENSNLEG00000003339 Nomascus leucogenys ENSNLEG00000003339 N
ENSOARG00000001098 Ovis aries ENSOARG00000001098 N
ENSP00000299237 Macaca fascicularis ENSP00000299237 N
ENSPANG00000015991 Papio anubis ENSPANG00000015991 N
ENSSTOG00000019944 Ictidomys tridecemlineatus ENSSTOG00000019944 N
Zfp319 Rattus norvegicus ENSRNOG00000013460 N
ZNF319 Microcebus murinus ENSMICG00000004897 N
ZNF319 Tursiops truncatus ENSTTRG00000008426 N
ZNF319 Pteropus vampyrus ENSPVAG00000004612 N
ZNF319 Otolemur garnettii ENSOGAG00000003269 N
ZNF319 Macaca mulatta ENSMMUG00000022668 N
ZNF319 Loxodonta africana ENSLAFG00000002266 N
ZNF319 Gorilla gorilla ENSGGOG00000017145 N
ZNF319 Homo sapiens ENSG00000166188 N
ZNF319 Felis catus ENSFCAG00000024689 N
ZNF319 Dasypus novemcinctus ENSDNOG00000042239 N
ZNF319 Callithrix jacchus ENSCJAG00000022826 N
ZNF319 Canis familiaris ENSCAFG00000008559 N
ZNF319 Bos taurus ENSBTAG00000045572 N