PRHA (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 scaffold_701235.1 T223039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.706 0.714
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_701235.1 Homeodomain 460 515

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_06293 Aspergillus nidulans CADANIAG00010534 N 0.000
AUEXF2481DRAFT_349637 Aureobasidium subglaciale AUEXF2481DRAFT_349637 N 0.000
Bcin14g05090 Botrytis cinerea Bcin14g05090 N 0.000
CCM_08978 Cordyceps militaris CCM_08978 I 0.000
CIMG_05220 Coccidioides immitis CIMG_05220 N 0.000
CPC735_064880 Coccidioides posadasii CPC735_064880 N 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00440 I 0.000
EURHEDRAFT_513555 Aspergillus ruber EURHEDRAFT_513555 N 0.000
FFUJ_03763 Fusarium fujikuroi FFUJ_03763 I 0.000
fgeneshPB_pg.14__231 Phycomyces blakesleeanus fgeneshPB_pg.14__231 N 0.000
FGRRES_01562 Fusarium graminearum FGRRES_01562 I 0.000
FOXG_11146 Fusarium oxysporum FOXG_11146 I 0.000
GGTG_11194 Gaeumannomyces graminis GGTG_11194 I 0.000
HMPREF1541_02999 Cyphellophora europaea HMPREF1541_02999 N 0.000
K437DRAFT_291790 Tilletiaria anomala K437DRAFT_291790 N 0.000
M422DRAFT_215363 Sphaerobolus stellatus M422DRAFT_215363 N 0.000
M422DRAFT_232009 Sphaerobolus stellatus M422DRAFT_232009 N 0.000
M437DRAFT_14214 Aureobasidium melanogenum M437DRAFT_14214 N 0.000
MAJ_06041 Metarhizium majus MAJ_06041 I 0.000
MAPG_00750 Magnaporthe poae MAPG_00750 I 0.000
MBR_06803 Metarhizium brunneum MBR_06803 I 0.000
MCYG_04265 Microsporum canis MCYG_04265 N 0.000
MGU_04562 Metarhizium guizhouense MGU_04562 I 0.000
NechaG65166 Fusarium solani NechaG65166 I 0.000
OCS_05478 Ophiocordyceps sinensis OCS_05478 I 0.000
OIDMADRAFT_194965 Oidiodendron maius OIDMADRAFT_194965 I 0.000
PV05_10153 Exophiala xenobiotica PV05_10153 N 0.000
PV06_09439 Exophiala oligosperma PV06_09439 N 0.000
PV07_11052 Cladophialophora immunda PV07_11052 N 0.000
PV10_03194 Exophiala mesophila PV10_03194 N 0.000
PV11_09075 Exophiala sideris PV11_09075 N 0.000
RO3G_02623 Rhizopus oryzae RO3G_02623 N 0.000
SPPG_00605 Spizellomyces punctatus SPPG_00605 N 0.000
TESG_01285 Trichophyton tonsurans TESG_01285 N 0.000
TRIREDRAFT_78799 Trichoderma reesei TRIREDRAFT_78799 I 0.000
VHEMI05725 Torrubiella hemipterigena VHEMI05725 I 0.000
X797_000023 Metarhizium robertsii X797_000023 I 0.000