Solyc06g074120.2 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc06g074120.2 T223594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.827 0.783
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.587
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.618 0.457
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.618 0.457
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.618 0.457
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.618 0.457
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g074120.2.1 Homeodomain 416 464

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_214436 Agaricus bisporus AGABI2DRAFT_214436 N 0.000
BOTBODRAFT_172908 Botryobasidium botryosum BOTBODRAFT_172908 N 0.000
BOTBODRAFT_69421 Botryobasidium botryosum BOTBODRAFT_69421 N 0.000
CERSUDRAFT_110761 Ceriporiopsis subvermispora CERSUDRAFT_110761 N 0.000
CY34DRAFT_25000 Suillus luteus CY34DRAFT_25000 N 0.000
estExt_Genewise1Plus.C_10795 Heterobasidion annosum estExt_Genewise1Plus.C_10795 N 0.000
FOMPIDRAFT_1035071 Fomitopsis pinicola FOMPIDRAFT_1035071 N 0.000
GALMADRAFT_233700 Galerina marginata GALMADRAFT_233700 N 0.000
GLOTRDRAFT_68601 Gloeophyllum trabeum GLOTRDRAFT_68601 N 0.000
HETIRDRAFT_468737 Heterobasidion irregulare HETIRDRAFT_468737 N 0.000
JAAARDRAFT_203058 Jaapia argillacea JAAARDRAFT_203058 N 0.000
K443DRAFT_673799 Laccaria amethystina K443DRAFT_673799 N 0.000
LACBIDRAFT_300743 Laccaria bicolor LACBIDRAFT_300743 N 0.000
M378DRAFT_155674 Amanita muscaria M378DRAFT_155674 N 0.000
M404DRAFT_134644 Pisolithus tinctorius M404DRAFT_134644 N 0.000
M407DRAFT_26135 Tulasnella calospora M407DRAFT_26135 N 0.000
M407DRAFT_29482 Tulasnella calospora M407DRAFT_29482 N 0.000
M408DRAFT_325789 Serendipita vermifera M408DRAFT_325789 N 0.000
M413DRAFT_439826 Hebeloma cylindrosporum M413DRAFT_439826 N 0.000
Moror_1245 Moniliophthora roreri Moror_1245 N 0.000
PaG_06601 Pseudozyma aphidis PaG_06601 N 0.000
PAN0_008d3627 Pseudozyma antarctica PAN0_008d3627 N 0.000
PAXRUDRAFT_157512 Paxillus rubicundulus PAXRUDRAFT_157512 N 0.000
PHACADRAFT_247554 Phanerochaete carnosa PHACADRAFT_247554 N 0.000
PHLGIDRAFT_83469 Phlebiopsis gigantea PHLGIDRAFT_83469 N 0.000
PHSY_000700 Pseudozyma hubeiensis PHSY_000700 N 0.000
PIIN_04099 Piriformospora indica PIIN_04099 N 0.000
PILCRDRAFT_817327 Piloderma croceum PILCRDRAFT_817327 N 0.000
PISMIDRAFT_91300 Pisolithus microcarpus PISMIDRAFT_91300 N 0.000
PLEOSDRAFT_49413 Pleurotus ostreatus PLEOSDRAFT_49413 N 0.000
SCHCODRAFT_49649 Schizophyllum commune SCHCODRAFT_49649 N 0.000
SCLCIDRAFT_108680 Scleroderma citrinum SCLCIDRAFT_108680 N 0.000
sr13281 Sporisorium reilianum sr13281 N 0.000
UM02061 Ustilago maydis UM02061 N 0.000
V565_027830 Rhizoctonia solani V565_027830 N 0.000
V565_176710 Rhizoctonia solani V565_176710 N 0.000