CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAPADRAFT_63770
(
Spathaspora passalidarum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SPAPADRAFT_63770
T223645_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGW30163
Homeodomain
196
255
RKTRNNLPKEITFILLKWLNDHLNHPYPNSFEKNQLMMATGLNQQQLSNWFINARRRKIK
Links
Other
Homeodomain
family TFs
Other
Spathaspora passalidarum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28324.m000396
Ricinus communis
28324.m000396
I
0.000
30055.m001619
Ricinus communis
30055.m001619
I
0.000
30170.m014171
Ricinus communis
30170.m014171
I
0.000
AC233850.1_FG005
Zea mays
AC233850.1_FG005
I
0.000
ALNC14_009330
Albugo laibachii
ALNC14_009330
I
0.000
AMTR_s00030p00231260
Amborella trichopoda
AMTR_s00030p00231260
I
0.000
Aquca_002_00087
Aquilegia coerulea
Aquca_002_00087
I
0.000
Aquca_072_00025
Aquilegia coerulea
Aquca_072_00025
I
0.000
ASIM_0000970501
Anisakis simplex
ASIM_0000970501
I
0.000
BGIOSGA006304
Oryza indica
BGIOSGA006304
I
0.000
BGIOSGA015708
Oryza indica
BGIOSGA015708
I
0.000
BGIOSGA036595
Oryza indica
BGIOSGA036595
I
0.000
Bo3g015790
Brassica oleracea
Bo3g015790
I
0.000
Bo3g029900
Brassica oleracea
Bo3g029900
I
0.000
Bo4g035150
Brassica oleracea
Bo4g035150
I
0.000
Bo9g106030
Brassica oleracea
Bo9g106030
I
0.000
Bostr.23794s0493
Boechera stricta
Bostr.23794s0493
I
0.000
Bostr.26527s0055
Boechera stricta
Bostr.26527s0055
I
0.000
Bra002398
Brassica rapa
Bra002398
I
0.000
Bra005305
Brassica rapa
Bra005305
I
0.000
Bra006615
Brassica rapa
Bra006615
I
0.000
Bra017268
Brassica rapa
Bra017268
I
0.000
Bra023047
Brassica rapa
Bra023047
I
0.000
BRADI3G45130
Brachypodium distachyon
BRADI3G45130
I
0.000
BRADI5G01920
Brachypodium distachyon
BRADI5G01920
I
0.000
Cagra.0993s0113
Capsella grandiflora
Cagra.0993s0113
I
0.000
Cagra.5627s0006
Capsella grandiflora
Cagra.5627s0006
I
0.000
CapteG92886
Capitella teleta
CapteG92886
I
0.000
Carubv10003027m.g
Capsella rubella
Carubv10003027m.g
I
0.000
Carubv10022932m.g
Capsella rubella
Carubv10022932m.g
I
0.000
cassava31670.valid.m1
Manihot esculenta
cassava31670.valid.m1
I
0.000
cassava31671.valid.m1
Manihot esculenta
cassava31671.valid.m1
I
0.000
cassava45095.m1
Manihot esculenta
cassava45095.m1
I
0.000
Ca_14410
Cicer arietinum
Ca_14410
I
0.000
Ca_15178
Cicer arietinum
Ca_15178
I
0.000
CGI_10007193
Crassostrea gigas
CGI_10007193
I
0.000
Ciclev10011632m.g
Citrus clementina
Ciclev10011632m.g
I
0.000
Ciclev10028409m.g
Citrus clementina
Ciclev10028409m.g
I
0.000
Cla008768
Citrullus lanatus
Cla008768
I
0.000
Cla018710
Citrullus lanatus
Cla018710
I
0.000
Cucsa.083720
Cucumis sativus
Cucsa.083720
I
0.000
Cucsa.185850
Cucumis sativus
Cucsa.185850
I
0.000
Cucsa.263480
Cucumis sativus
Cucsa.263480
I
0.000
D917_10139
Trichinella nativa
D917_10139
I
0.000
E2f
Drosophila melanogaster
FBgn0011766
D
0.000
E2F1
Erinaceus europaeus
ENSEEUG00000009987
I
0.000
E2F1
Takifugu rubripes
ENSTRUG00000011188
I
0.000
E2F1
Arabidopsis lyrata
fgenesh2_kg.6__2206__AT5G22220.2
I
0.000
E2F1
Vitis vinifera
VIT_06s0080g01110
I
0.000
E2F3
Callithrix jacchus
ENSCJAG00000019544
I
0.000
E2F3
Homo sapiens
ENSG00000112242
D
0.000
e2f3
Gasterosteus aculeatus
ENSGACG00000006632
I
0.000
E2F3
Macaca mulatta
ENSMMUG00000017649
I
0.000
E2f3
Rattus norvegicus
ENSRNOG00000029273
I
0.000
E2F3
Tursiops truncatus
ENSTTRG00000009038
I
0.000
E2F3
Arabidopsis lyrata
fgenesh2_kg.4__1634__AT2G36010.3
I
0.000
E2F3
Vitis vinifera
VIT_08s0007g02510
I
0.000
E2F4
Anolis carolinensis
ENSACAG00000028484
I
0.000
E2F4
Bos taurus
ENSBTAG00000012063
I
0.000
E2F4
Canis familiaris
ENSCAFG00000020375
I
0.000
E2F4
Callithrix jacchus
ENSCJAG00000016403
I
0.000
E2F4
Cavia porcellus
ENSCPOG00000010845
I
0.000
E2F4
Dasypus novemcinctus
ENSDNOG00000041139
I
0.000
E2F4
Equus caballus
ENSECAG00000015595
I
0.000
E2F4
Felis catus
ENSFCAG00000009268
I
0.000
E2F4
Homo sapiens
ENSG00000205250
D
0.000
E2F4
Gallus gallus
ENSGALG00000001722
I
0.000
E2F4
Gorilla gorilla
ENSGGOG00000011924
I
0.000
E2F4
Meleagris gallopavo
ENSMGAG00000002517
I
0.000
E2F4
Myotis lucifugus
ENSMLUG00000023162
I
0.000
E2F4
Macaca mulatta
ENSMMUG00000020258
I
0.000
E2F4
Monodelphis domestica
ENSMODG00000006150
I
0.000
E2f4
Mus musculus
ENSMUSG00000014859
D
0.000
E2F4
Otolemur garnettii
ENSOGAG00000000010
I
0.000
E2F4
Ochotona princeps
ENSOPRG00000015165
I
0.000
E2F4
Procavia capensis
ENSPCAG00000013266
I
0.000
E2F4
Pan troglodytes
ENSPTRG00000031180
I
0.000
E2F4
Pteropus vampyrus
ENSPVAG00000005274
I
0.000
E2f4
Rattus norvegicus
ENSRNOG00000015708
I
0.000
E2F4
Sus scrofa
ENSSSCG00000002787
I
0.000
E2F4
Taeniopygia guttata
ENSTGUG00000005417
I
0.000
e2f5
Danio rerio
ENSDARG00000038812
I
0.000
E2f5
Rattus norvegicus
ENSRNOG00000010760
I
0.000
e2f5
Takifugu rubripes
ENSTRUG00000002354
I
0.000
E2F6
Ornithorhynchus anatinus
ENSOANG00000002666
I
0.000
E2FA
Arabidopsis thaliana
AT2G36010
D
0.000
E2FB
Arabidopsis thaliana
AT5G22220
I
0.000
EFV59050
Trichinella spiralis
EFV59050
I
0.000
ENSAMEG00000017275
Ailuropoda melanoleuca
ENSAMEG00000017275
I
0.000
ENSAMXG00000001602
Astyanax mexicanus
ENSAMXG00000001602
I
0.000
ENSCSAG00000003814
Chlorocebus sabaeus
ENSCSAG00000003814
I
0.000
ENSDORG00000015131
Dipodomys ordii
ENSDORG00000015131
I
0.000
ENSETEG00000006678
Echinops telfairi
ENSETEG00000006678
I
0.000
ENSFALG00000007077
Ficedula albicollis
ENSFALG00000007077
I
0.000
ENSFALG00000010803
Ficedula albicollis
ENSFALG00000010803
I
0.000
ENSMPUG00000005564
Mustela putorius furo
ENSMPUG00000005564
I
0.000
ENSNLEG00000002804
Nomascus leucogenys
ENSNLEG00000002804
I
0.000
ENSNLEG00000004342
Nomascus leucogenys
ENSNLEG00000004342
I
0.000
ENSOCUG00000010022
Oryctolagus cuniculus
ENSOCUG00000010022
I
0.000
ENSONIG00000007069
Oreochromis niloticus
ENSONIG00000007069
I
0.000
ENSP00000368686-D1
Bos grunniens
ENSP00000368686-D1
I
0.000
ENSPANG00000016794
Papio anubis
ENSPANG00000016794
I
0.000
ENSPFOG00000016235
Poecilia formosa
ENSPFOG00000016235
I
0.000
ENSPPYG00000007445
Pongo abelii
ENSPPYG00000007445
I
0.000
ENSPSIG00000015377
Pelodiscus sinensis
ENSPSIG00000015377
I
0.000
ENSSTOG00000016434
Ictidomys tridecemlineatus
ENSSTOG00000016434
I
0.000
ENSTSYG00000007645
Tarsius syrichta
ENSTSYG00000007645
I
0.000
estExt_fgenesh1_pg.C_1330005
Phytophthora capsici
estExt_fgenesh1_pg.C_1330005
I
0.000
Eucgr.A02602
Eucalyptus grandis
Eucgr.A02602
I
0.000
Eucgr.J00539
Eucalyptus grandis
Eucgr.J00539
I
0.000
evm.TU.supercontig_104.59
Carica papaya
evm.TU.supercontig_104.59
I
0.000
evm.TU.supercontig_195.40
Carica papaya
evm.TU.supercontig_195.40
I
0.000
F443_00888
Phytophthora parasitica
F443_00888
I
0.000
F775_03094
Aegilops tauschii
F775_03094
I
0.000
GD19970
Drosophila simulans
FBgn0191453
I
0.000
GE24969
Drosophila yakuba
FBgn0242063
I
0.000
gene08432-v1.0-hybrid
Fragaria vesca
gene08432-v1.0-hybrid
I
0.000
gene15311-v1.0-hybrid
Fragaria vesca
gene15311-v1.0-hybrid
I
0.000
GG14417
Drosophila erecta
FBgn0106676
I
0.000
GLOINDRAFT_4310
Rhizophagus irregularis
GLOINDRAFT_4310
I
0.000
GLYMA02G35850
Glycine max
GLYMA02G35850
I
0.000
GLYMA04G02720
Glycine max
GLYMA04G02720
I
0.000
GLYMA10G09410
Glycine max
GLYMA10G09410
I
0.000
GLYMA11G18401
Glycine max
GLYMA11G18401
I
0.000
GLYMA12G09860
Glycine max
GLYMA12G09860
I
0.000
GM11000
Drosophila sechellia
FBgn0165945
I
0.000
Gorai.001G123900
Gossypium raimondii
Gorai.001G123900
I
0.000
Gorai.002G157200
Gossypium raimondii
Gorai.002G157200
I
0.000
Gorai.006G114300
Gossypium raimondii
Gorai.006G114300
I
0.000
Gorai.007G366600
Gossypium raimondii
Gorai.007G366600
I
0.000
Gorai.013G257100
Gossypium raimondii
Gorai.013G257100
I
0.000
GRMZM2G041701
Zea mays
GRMZM2G041701
I
0.000
GRMZM2G050590
Zea mays
GRMZM2G050590
I
0.000
GRMZM2G052515
Zea mays
GRMZM2G052515
I
0.000
GSMUA_Achr10G15780_001
Musa acuminata
GSMUA_Achr10G15780_001
I
0.000
GSMUA_Achr2G20420_001
Musa acuminata
GSMUA_Achr2G20420_001
I
0.000
GSMUA_Achr4G17950_001
Musa acuminata
GSMUA_Achr4G17950_001
I
0.000
GSMUA_Achr6G07100_001
Musa acuminata
GSMUA_Achr6G07100_001
I
0.000
GSMUA_Achr6G18220_001
Musa acuminata
GSMUA_Achr6G18220_001
I
0.000
gw.680.60.1
Branchiostoma floridae
gw.680.60.1
I
0.000
HHAL006519-PA
Halyomorpha halys
HHAL006519-PA
I
0.000
LjSGA_014916.1
Lotus japonicus
LjSGA_014916.1
I
0.000
LjSGA_021246.1
Lotus japonicus
LjSGA_021246.1
I
0.000
LLOJ007119
Lutzomyia longipalpis
LLOJ007119
I
0.000
LotgiG171492
Lottia gigantea
LotgiG171492
I
0.000
LPERR04G00320
Leersia perrieri
LPERR04G00320
I
0.000
LPERR12G03370
Leersia perrieri
LPERR12G03370
I
0.000
Lus10004217.g
Linum usitatissimum
Lus10004217.g
I
0.000
Lus10005209.g
Linum usitatissimum
Lus10005209.g
I
0.000
Lus10013321.g
Linum usitatissimum
Lus10013321.g
I
0.000
Lus10016972.g
Linum usitatissimum
Lus10016972.g
I
0.000
Lus10021298.g
Linum usitatissimum
Lus10021298.g
I
0.000
Lus10029421.g
Linum usitatissimum
Lus10029421.g
I
0.000
maker-piw_contig_136-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_136-snap-gene-0.25
I
0.000
MDP0000172879
Malus domestica
MDP0000172879
I
0.000
MDP0000197904
Malus domestica
MDP0000197904
I
0.000
MDP0000200630
Malus domestica
MDP0000200630
I
0.000
mgf014795m
Mimulus guttatus
mgf014795m
I
0.000
mgf018602m
Mimulus guttatus
mgf018602m
I
0.000
ML14475a
Mnemiopsis leidyi
ML14475a
I
0.000
MLOC_70470
Hordeum vulgare
MLOC_70470
I
0.000
MTR_1g105110
Medicago truncatula
MTR_1g105110
I
0.000
MTR_4g052000
Medicago truncatula
MTR_4g052000
I
0.000
Myotis_brandtii_E2f4_10015050
Myotis brandtii
Myotis_brandtii_E2f4_10015050
I
0.000
nDi.2.2.2.g03085
Dirofilaria immitis
nDi.2.2.2.g03085
I
0.000
OB02G27210
Oryza brachyantha
OB02G27210
I
0.000
OB12G13530
Oryza brachyantha
OB12G13530
I
0.000
OBART02G19430
Oryza barthii
OBART02G19430
I
0.000
OBART04G00680
Oryza barthii
OBART04G00680
I
0.000
OBART12G03570
Oryza barthii
OBART12G03570
I
0.000
OGLUM02G19730
Oryza glumaepatula
OGLUM02G19730
I
0.000
OGLUM04G00590
Oryza glumaepatula
OGLUM04G00590
I
0.000
OGLUM12G04270
Oryza glumaepatula
OGLUM12G04270
I
0.000
OLONG_000194
Oryza longistaminata
OLONG_000194
I
0.000
OLONG_023990
Oryza longistaminata
OLONG_023990
I
0.000
OLONG_026747
Oryza longistaminata
OLONG_026747
I
0.000
OMERI02G19320
Oryza meridionalis
OMERI02G19320
I
0.000
OMERI04G00620
Oryza meridionalis
OMERI04G00620
I
0.000
OMERI12G01820
Oryza meridionalis
OMERI12G01820
I
0.000
ONIVA02G21500
Oryza nivara
ONIVA02G21500
I
0.000
ONIVA10G05260
Oryza nivara
ONIVA10G05260
I
0.000
ONIVA12G03230
Oryza nivara
ONIVA12G03230
I
0.000
OPUNC02G17370
Oryza punctata
OPUNC02G17370
I
0.000
OPUNC04G00710
Oryza punctata
OPUNC04G00710
I
0.000
OPUNC12G03430
Oryza punctata
OPUNC12G03430
I
0.000
orange1.1g012778m.g
Citrus sinensis
orange1.1g012778m.g
I
0.000
orange1.1g015627m.g
Citrus sinensis
orange1.1g015627m.g
I
0.000
orange1.1g015878m.g
Citrus sinensis
orange1.1g015878m.g
I
0.000
ORGLA02G0166600
Oryza glaberrima
ORGLA02G0166600
I
0.000
ORGLA04G0006000
Oryza glaberrima
ORGLA04G0006000
I
0.000
ORGLA12G0034600
Oryza glaberrima
ORGLA12G0034600
I
0.000
ORUFI02G20490
Oryza rufipogon
ORUFI02G20490
I
0.000
ORUFI04G00690
Oryza rufipogon
ORUFI04G00690
I
0.000
ORUFI12G04170
Oryza rufipogon
ORUFI12G04170
I
0.000
OS02G0537500
Oryza sativa
OS02G0537500
I
0.000
OS04G0112200
Oryza sativa
OS04G0112200
I
0.000
OS12G0158800
Oryza sativa
OS12G0158800
I
0.000
Pavir.Ab01863
Panicum virgatum
Pavir.Ab01863
I
0.000
Pavir.Ba00780
Panicum virgatum
Pavir.Ba00780
I
0.000
Pavir.Ca00172
Panicum virgatum
Pavir.Ca00172
I
0.000
Pavir.J28624
Panicum virgatum
Pavir.J28624
I
0.000
Pavir.J29330
Panicum virgatum
Pavir.J29330
I
0.000
Pavir.J38646
Panicum virgatum
Pavir.J38646
I
0.000
PDK_20s1576491g001
Phoenix dactylifera
PDK_20s1576491g001
I
0.000
PDK_20s1616661g001
Phoenix dactylifera
PDK_20s1616661g001
I
0.000
PGSC0003DMG400003778
Solanum tuberosum
PGSC0003DMG400003778
I
0.000
PGSC0003DMG400016418
Solanum tuberosum
PGSC0003DMG400016418
I
0.000
PGSC0003DMG400019629
Solanum tuberosum
PGSC0003DMG400019629
I
0.000
PGSC0003DMG402005932
Solanum tuberosum
PGSC0003DMG402005932
I
0.000
PITG_01579
Phytophthora infestans
PITG_01579
I
0.000
PK10965.1
Cannabis sativa
PK10965.1
I
0.000
PK11630.1
Cannabis sativa
PK11630.1
I
0.000
PK18387.1
Cannabis sativa
PK18387.1
I
0.000
Pm001437
Prunus mume
Pm001437
I
0.000
Pm028019
Prunus mume
Pm028019
I
0.000
Pm029349
Prunus mume
Pm029349
I
0.000
Pm031036
Prunus mume
Pm031036
I
0.000
POPTR_0004s21100
Populus trichocarpa
POPTR_0004s21100
I
0.000
POPTR_0006s22150
Populus trichocarpa
POPTR_0006s22150
I
0.000
POPTR_0009s16350
Populus trichocarpa
POPTR_0009s16350
I
0.000
PRUPE_ppa005262mg
Prunus persica
PRUPE_ppa005262mg
I
0.000
PRUPE_ppa014783mg
Prunus persica
PRUPE_ppa014783mg
I
0.000
Pvit_02135
Pogona vitticeps
Pvit_02135
I
0.000
Pvit_05435
Pogona vitticeps
Pvit_05435
I
0.000
Pvit_14741
Pogona vitticeps
Pvit_14741
I
0.000
PXEA_0001181501
Protopolystoma xenopodis
PXEA_0001181501
I
0.000
RO3G_12705
Rhizopus oryzae
RO3G_12705
I
0.000
RPRC007256
Rhodnius prolixus
RPRC007256
I
0.000
SapurV1A.0125s0090
Salix purpurea
SapurV1A.0125s0090
I
0.000
SapurV1A.1836s0050
Salix purpurea
SapurV1A.1836s0050
I
0.000
Sb04g021970
Sorghum bicolor
Sb04g021970
I
0.000
Sb06g000890
Sorghum bicolor
Sb06g000890
I
0.000
Sb08g003670
Sorghum bicolor
Sb08g003670
I
0.000
SELMODRAFT_136738
Selaginella moellendorffii
SELMODRAFT_136738
I
0.000
SELMODRAFT_137588
Selaginella moellendorffii
SELMODRAFT_137588
I
0.000
Si010044m.g
Setaria italica
Si010044m.g
I
0.000
Si017108m.g
Setaria italica
Si017108m.g
I
0.000
SINV25323
Solenopsis invicta
SINV25323
I
0.000
SMTD_0001300001
Schistosoma mattheei
SMTD_0001300001
I
0.000
Solyc01g007760.2
Solanum lycopersicum
Solyc01g007760.2
I
0.000
Solyc11g068800.1
Solanum lycopersicum
Solyc11g068800.1
I
0.000
TCM_022853
Theobroma cacao
TCM_022853
I
0.000
TCM_041291
Theobroma cacao
TCM_041291
I
0.000
Thhalv10015650m.g
Eutrema salsugineum
Thhalv10015650m.g
I
0.000
Thhalv10016580m.g
Eutrema salsugineum
Thhalv10016580m.g
I
0.000
Traes_2AS_20DD727DC
Triticum aestivum
Traes_2AS_20DD727DC
I
0.000
Traes_2DS_524E9B6A3
Triticum aestivum
Traes_2DS_524E9B6A3
I
0.000
Traes_6AS_9596E4B58
Triticum aestivum
Traes_6AS_9596E4B58
I
0.000
Traes_6BL_FDC8BDE8A
Triticum aestivum
Traes_6BL_FDC8BDE8A
I
0.000
TRIUR3_05250
Triticum urartu
TRIUR3_05250
I
0.000