ATH1 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_04s0008g00880 T224521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.855 0.900
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.604 0.520
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0008g00880.t01 Homeodomain 496 548

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

953 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.000
BRADI3G56290 Brachypodium distachyon BRADI3G56290 I 0.000
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.000
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.000
OBART02G31030 Oryza barthii OBART02G31030 I 0.000
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.000
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.000
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.000
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.000
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.000
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.000
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.000
OS02G0728001 Oryza sativa OS02G0728001 D 0.000
Si019897m.g Setaria italica Si019897m.g I 0.000
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.000
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.000
TRIUR3_31678 Triticum urartu TRIUR3_31678 N 0.000