VIT_13s0019g02450 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_13s0019g02450 T224557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.836 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.624 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.600 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.600 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.600 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.600 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g02450.t01 Homeodomain 325 376

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

985 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006567 Aedes aegypti AAEL006567 I
Aan_R004293 Calypte anna Aan_R004293 I
ACYPI007295 Acyrthosiphon pisum ACYPI007295 N
Afo_R013625 Aptenodytes forsteri Afo_R013625 I
BGIBMGA013173 Bombyx mori BGIBMGA013173 N
Brh_R005672 Buceros rhinoceros Brh_R005672 I
CPIJ015473 Culex quinquefasciatus CPIJ015473 I
CpipJ_CPIJ015473 Culex pipiens CpipJ_CPIJ015473 I
ENSAMEG00000007541 Ailuropoda melanoleuca ENSAMEG00000007541 I
ENSAMXG00000008763 Astyanax mexicanus ENSAMXG00000008763 I
ENSAMXG00000020050 Astyanax mexicanus ENSAMXG00000020050 I
ENSAPLG00000003927 Anas platyrhynchos ENSAPLG00000003927 I
ENSCPOG00000014839 Cavia porcellus ENSCPOG00000014839 I
ENSCSAG00000013771 Chlorocebus sabaeus ENSCSAG00000013771 I
ENSFALG00000004754 Ficedula albicollis ENSFALG00000004754 I
ENSGMOG00000006979 Gadus morhua ENSGMOG00000006979 I
ENSGMOG00000011558 Gadus morhua ENSGMOG00000011558 I
ENSLACG00000018117 Latimeria chalumnae ENSLACG00000018117 I
ENSLOCG00000004411 Lepisosteus oculatus ENSLOCG00000004411 I
ENSMEUG00000015884 Macropus eugenii ENSMEUG00000015884 I
ENSMPUG00000012867 Mustela putorius furo ENSMPUG00000012867 I
ENSOARG00000015698 Ovis aries ENSOARG00000015698 I
ENSONIG00000008133 Oreochromis niloticus ENSONIG00000008133 I
ENSONIG00000008731 Oreochromis niloticus ENSONIG00000008731 I
ENSP00000384177-D1 Bos grunniens ENSP00000384177-D1 I
ENSPANG00000024466 Papio anubis ENSPANG00000024466 I
ENSPFOG00000010412 Poecilia formosa ENSPFOG00000010412 I
ENSPFOG00000015158 Poecilia formosa ENSPFOG00000015158 I
ENSPSIG00000013581 Pelodiscus sinensis ENSPSIG00000013581 I
ENSPVAG00000002166 Pteropus vampyrus ENSPVAG00000002166 I
ENSSHAG00000011999 Sarcophilus harrisii ENSSHAG00000011999 N
ENSSTOG00000026802 Ictidomys tridecemlineatus ENSSTOG00000026802 I
ENSXMAG00000008629 Xiphophorus maculatus ENSXMAG00000008629 I
ENSXMAG00000011266 Xiphophorus maculatus ENSXMAG00000011266 I
Gfo_R012737 Geospiza fortis Gfo_R012737 I
HMEL003564 Heliconius melpomene HMEL003564 N
L798_06616 Zootermopsis nevadensis L798_06616 N
LDEC010970 Leptinotarsa decemlineata LDEC010970 I
MCINX010388 Melitaea cinxia MCINX010388 N
MNT Taeniopygia guttata ENSTGUG00000008774 I
MNT Tetraodon nigroviridis ENSTNIG00000005816 I
MNT Takifugu rubripes ENSTRUG00000015800 I
MNT Callithrix jacchus ENSCJAG00000012389 I
MNT Canis familiaris ENSCAFG00000019295 I
MNT Bos taurus ENSBTAG00000025129 I
Mnt Rattus norvegicus ENSRNOG00000002894 I
MNT Gallus gallus ENSGALG00000005830 I
MNT Procavia capensis ENSPCAG00000013160 I
MNT Oryzias latipes ENSORLG00000007865 I
MNT Pan troglodytes ENSPTRG00000008549 I
MNT Gorilla gorilla ENSGGOG00000002455 I
MNT Gasterosteus aculeatus ENSGACG00000008790 I
MNT Otolemur garnettii ENSOGAG00000004499 I
MNT Oryctolagus cuniculus ENSOCUG00000016100 I
MNT Danio rerio ENSDARG00000101859 I
Mnt Mus musculus ENSMUSG00000000282 D
MNT Dasypus novemcinctus ENSDNOG00000040019 I
MNT Macaca mulatta ENSMMUG00000022004 I
MNT Homo sapiens ENSG00000070444 D
MNT Felis catus ENSFCAG00000006315 I
MNT Meleagris gallopavo ENSMGAG00000008592 I
mnt.L Xenopus laevis XB-GENE-6087152 I
mntb Takifugu rubripes ENSTRUG00000011273 I
mntb Gasterosteus aculeatus ENSGACG00000020487 I
mntb Danio rerio ENSDARG00000073988 I
mntb Oryzias latipes ENSORLG00000002734 I
Ogr16275 Ophisaurus gracilis Ogr16275 I
Pvit_02549 Pogona vitticeps Pvit_02549 I
Sakowv30028253m.g Saccoglossus kowalevskii Sakowv30028253m.g I
SMAR003191 Strigamia maritima SMAR003191 I
TC015361 Tribolium castaneum TC015361 I
YQE_11244 Dendroctonus ponderosae YQE_11244 N