Alligator_sinensis_CCG000180.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG000180.1 T225144_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000180.1 Homeodomain 18 50

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009092 Aedes aegypti AAEL009092 N 0.646
AAL89720 Xenopus laevis AAL89720 N 0.675
AALB003420 Anopheles albimanus AALB003420 N 0.679
AARA002212 Anopheles arabiensis AARA002212 N 0.699
AATE002410 Anopheles atroparvus AATE002410 N 0.694
ACHR009221 Anopheles christyi ACHR009221 N 0.683
ADAC010420 Anopheles darlingi ADAC010420 N 0.667
AEPI009380 Anopheles epiroticus AEPI009380 N 0.619
AFAF012002 Anopheles farauti AFAF012002 N 0.612
Afo_R008528 Aptenodytes forsteri Afo_R008528 N 0.640
AGAP001761 Anopheles gambiae AGAP001761 N 0.612
Alligator_sinensis_CCG004678.1 Alligator sinensis Alligator_sinensis_CCG004678.1 N 0.659
AMEC017514 Anopheles melas AMEC017514 N 0.699
AMEM008456 Anopheles merus AMEM008456 N 0.612
AQUA000629 Anopheles quadriannulatus AQUA000629 N 0.699
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N 0.663
cers2a Takifugu rubripes ENSTRUG00000012292 N 0.663
cers3.L Xenopus laevis XB-GENE-6251639 N 0.704
cers3b Danio rerio ENSDARG00000036337 N 0.679
cers4b Danio rerio ENSDARG00000018619 N 0.664
cers4b Takifugu rubripes ENSTRUG00000000191 N 0.681
CERS5 Oryzias latipes ENSORLG00000010219 N 0.675
CERS5 Takifugu rubripes ENSTRUG00000010435 N 0.738
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N 0.675
cers5.S Xenopus laevis XB-GENE-866438 N 0.675
CLEC001936 Cimex lectularius CLEC001936 N 0.609
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N 0.659
CPIJ012963 Culex quinquefasciatus CPIJ012963 N 0.715
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N 0.715
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N 0.675
ENSCSAVG00000011823 Ciona savignyi ENSCSAVG00000011823 N 0.616
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N 0.708
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N 0.675
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N 0.732
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N 0.659
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N 0.726
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N 0.722
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N 0.644
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N 0.675
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N 0.679
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N 0.675
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N 0.661
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N 0.705
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N 0.695
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N 0.718
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N 0.675
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N 0.677
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N 0.677
HMEL006147 Heliconius melpomene HMEL006147 N 0.674
KGM_15429 Danaus plexippus KGM_15429 N 0.674
KGM_16996 Danaus plexippus KGM_16996 N 0.611
L798_00373 Zootermopsis nevadensis L798_00373 N 0.628
LotgiG226091 Lottia gigantea LotgiG226091 N 0.699
MCINX005366 Melitaea cinxia MCINX005366 N 0.698
MCINX005367 Melitaea cinxia MCINX005367 N 0.634
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N 0.659
Ocbimv22016239m.g Octopus bimaculoides Ocbimv22016239m.g N 0.641
Ogr04694 Ophisaurus gracilis Ogr04694 N 0.656
RPRC008736 Rhodnius prolixus RPRC008736 N 0.611
SINV24013 Solenopsis invicta SINV24013 N 0.616
TTAC_0000327601 Hydatigera taeniaeformis TTAC_0000327601 N 0.619