Alligator_sinensis_CCG017539.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG017539.1 T225278_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG017539.1 Homeodomain 275 320
Alligator_sinensis_CCG017539.1 Homeodomain 440 496
Alligator_sinensis_CCG017539.1 Homeodomain 533 584
Alligator_sinensis_CCG017539.1 Homeodomain 634 686

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10007212 Chelonia mydas Cmyd_10007212 N 0.820
ENSAMEG00000019088 Ailuropoda melanoleuca ENSAMEG00000019088 N 0.662
ENSAPLG00000001368 Anas platyrhynchos ENSAPLG00000001368 N 0.783
ENSCSAG00000018613 Chlorocebus sabaeus ENSCSAG00000018613 N 0.697
ENSFALG00000014375 Ficedula albicollis ENSFALG00000014375 N 0.743
ENSGALG00000016390 Gallus gallus ENSGALG00000016390 N 0.766
ENSLACG00000007239 Latimeria chalumnae ENSLACG00000007239 N 0.711
ENSNLEG00000005201 Nomascus leucogenys ENSNLEG00000005201 N 0.697
ENSOARG00000020165 Ovis aries ENSOARG00000020165 N 0.674
ENSP00000314709 Macaca fascicularis ENSP00000314709 N 0.697
ENSP00000314709-D1 Bos grunniens ENSP00000314709-D1 N 0.674
ENSPANG00000002729 Papio anubis ENSPANG00000002729 N 0.697
ENSPSIG00000007720 Pelodiscus sinensis ENSPSIG00000007720 N 0.812
ENSSHAG00000011260 Sarcophilus harrisii ENSSHAG00000011260 N 0.734
ENSSTOG00000011248 Ictidomys tridecemlineatus ENSSTOG00000011248 N 0.697
Myotis_brandtii_ZHX2_10013265 Myotis brandtii Myotis_brandtii_ZHX2_10013265 N 0.669
Ogr14963 Ophisaurus gracilis Ogr14963 N 0.621
Pvit_18224 Pogona vitticeps Pvit_18224 N 0.620
ZHX2 Sorex araneus ENSSARG00000013090 N 0.651
Zhx2 Dipodomys ordii ENSDORG00000014490 N 0.674
ZHX2 Equus caballus ENSECAG00000023125 N 0.707
ZHX2 Erinaceus europaeus ENSEEUG00000003152 N 0.674
ZHX2 Dasypus novemcinctus ENSDNOG00000018935 N 0.716
ZHX2 Felis catus ENSFCAG00000026338 N 0.666
ZHX2 Bos taurus ENSBTAG00000026309 N 0.674
ZHX2 Canis familiaris ENSCAFG00000000967 N 0.666
ZHX2 Tursiops truncatus ENSTTRG00000016360 N 0.612
ZHX2 Taeniopygia guttata ENSTGUG00000012413 N 0.764
ZHX2 Cavia porcellus ENSCPOG00000011867 N 0.674
ZHX2 Sus scrofa ENSSSCG00000021586 N 0.703
ZHX2 Gorilla gorilla ENSGGOG00000006502 N 0.697
ZHX2 Myotis lucifugus ENSMLUG00000009074 N 0.669
Zhx2 Rattus norvegicus ENSRNOG00000005417 N 0.707
ZHX2 Pteropus vampyrus ENSPVAG00000003962 N 0.674
ZHX2 Pan troglodytes ENSPTRG00000020545 N 0.697
ZHX2 Callithrix jacchus ENSCJAG00000022247 N 0.697
ZHX2 Loxodonta africana ENSLAFG00000009019 N 0.672
ZHX2 Ochotona princeps ENSOPRG00000005053 N 0.674
ZHX2 Otolemur garnettii ENSOGAG00000026824 N 0.674
ZHX2 Oryctolagus cuniculus ENSOCUG00000008550 N
ZHX2 Meleagris gallopavo ENSMGAG00000015867 N 0.766
ZHX2 Anolis carolinensis ENSACAG00000009402 N
Zhx2 Mus musculus ENSMUSG00000071757 N 0.707
ZHX2 Macaca mulatta ENSMMUG00000005363 N 0.711