30131.m007089 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 30131.m007089 T227003_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.843 0.755
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30131.m007089 Homeodomain 407 458

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005064 Ailuropoda melanoleuca ENSAMEG00000005064 N 0.000
ENSECAG00000016694 Equus caballus ENSECAG00000016694 N 0.000
ENSMICG00000013028 Microcebus murinus ENSMICG00000013028 N 0.000
ENSNLEG00000008931 Nomascus leucogenys ENSNLEG00000008931 N 0.000
ENSOARG00000001821 Ovis aries ENSOARG00000001821 N 0.000
ENSP00000305533 Macaca fascicularis ENSP00000305533 N 0.000
ENSP00000305533-D1 Bos grunniens ENSP00000305533-D1 N 0.000
ENSPANG00000014746 Papio anubis ENSPANG00000014746 N 0.000
ENSPPYG00000014891 Pongo abelii ENSPPYG00000014891 N 0.000
ENSSTOG00000012475 Ictidomys tridecemlineatus ENSSTOG00000012475 N 0.000
ENSTSYG00000005287 Tarsius syrichta ENSTSYG00000005287 N 0.000
THAP9 Sorex araneus ENSSARG00000003861 N 0.000
THAP9 Oryctolagus cuniculus ENSOCUG00000000333 N 0.000
THAP9 Tupaia belangeri ENSTBEG00000017385 N 0.000
THAP9 Tursiops truncatus ENSTTRG00000007672 N 0.000
THAP9 Vicugna pacos ENSVPAG00000011351 N 0.000
THAP9 Pteropus vampyrus ENSPVAG00000016817 N 0.000
THAP9 Pan troglodytes ENSPTRG00000016222 N 0.000
THAP9 Macaca mulatta ENSMMUG00000008510 N 0.000
THAP9 Loxodonta africana ENSLAFG00000016726 N 0.000
THAP9 Gorilla gorilla ENSGGOG00000011634 N 0.000
THAP9 Homo sapiens ENSG00000168152 N 0.000
THAP9 Felis catus ENSFCAG00000022064 N 0.000
THAP9 Callithrix jacchus ENSCJAG00000005095 N 0.000
THAP9 Canis familiaris ENSCAFG00000009050 N 0.000
THAP9 Bos taurus ENSBTAG00000022450 N 0.000