CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf002707m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf002707m
T227678_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19166.1
M01249_2.00
Cannabis sativa
CCMCTAWY
RWTAGKGG
PBM
Lambert et al.(2019)
pTH11273
0.604
0.661
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf002707m
Homeodomain
653
708
KRPLKRLGEATTQRLYVSFSENQYPQRAAKENLANELGITVRQVSKWFENARWSYN
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G01900
Brachypodium distachyon
BRADI5G01900
N
F775_11333
Aegilops tauschii
F775_11333
N
MLOC_13653
Hordeum vulgare
MLOC_13653
N
MLOC_43888
Hordeum vulgare
MLOC_43888
N
MLOC_44850
Hordeum vulgare
MLOC_44850
N
Pavir.Ga02257
Panicum virgatum
Pavir.Ga02257
N
Pavir.Gb02374
Panicum virgatum
Pavir.Gb02374
N
Pavir.J18808
Panicum virgatum
Pavir.J18808
N
Si010685m.g
Setaria italica
Si010685m.g
N
Traes_2BL_070D9E2AD
Triticum aestivum
Traes_2BL_070D9E2AD
N
Traes_2DL_8BE259F4B
Triticum aestivum
Traes_2DL_8BE259F4B
N