Ocbimv22029425m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22029425m.g T227828_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.705 0.426
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.705 0.426
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.705 0.426
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.705 0.426
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.705 0.426
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.705 0.426
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.705 0.426
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.705 0.426
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.705 0.426
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.615 0.234
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.615 0.234
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.615 0.234
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22029425m.p Homeodomain 159 205

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

1129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPUR_08422 Claviceps purpurea CPUR_08422 N 0.000
DOTSEDRAFT_71721 Dothistroma septosporum DOTSEDRAFT_71721 N 0.000
estExt_fgenesh1_pg.C_70076 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_70076 N 0.000
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260 Nectria haematococca estExt_fgenesh1_pm.C_sca_3_chr4_2_00260 N 0.000
EV44_g2961 Erysiphe necator EV44_g2961 N 0.000
GLOINDRAFT_11716 Rhizophagus irregularis GLOINDRAFT_11716 N 0.000
HMPREF1624_07649 Sporothrix schenckii HMPREF1624_07649 N 0.000
LEMA_P026490.1 Leptosphaeria maculans LEMA_P026490.1 N 0.000
M413DRAFT_79145 Hebeloma cylindrosporum M413DRAFT_79145 N 0.000
MAJ_00912 Metarhizium majus MAJ_00912 N 0.000
MANI_001839 Metarhizium anisopliae MANI_001839 N 0.000
MBR_03195 Metarhizium brunneum MBR_03195 N 0.000
MGG_00349 Magnaporthe oryzae MGG_00349 N 0.000
MGU_03000 Metarhizium guizhouense MGU_03000 N 0.000
NechaG104073 Fusarium solani NechaG104073 N 0.000
PDE_09174 Penicillium oxalicum PDE_09174 N 0.000
PODANS_1_17820 Podospora anserina PODANS_1_17820 N 0.000
PVAR5_8408 Byssochlamys spectabilis PVAR5_8408 N 0.000
SPBR_07677 Sporothrix brasiliensis SPBR_07677 N 0.000
UCRPA7_4034 Togninia minima UCRPA7_4034 N 0.000
VHEMI02651 Torrubiella hemipterigena VHEMI02651 N 0.000
X797_004187 Metarhizium robertsii X797_004187 N 0.000