CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30030703m.g
(
Saccoglossus kowalevskii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Sakowv30030703m.g
T227946_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23936423_peptide
Homeodomain
51
108
KSSRYIYSETQSVLLEVIFTTTTEYLNRDMRKRIAIITNLSEKSIMKWFQNRRGQKRR
Links
Other
Homeodomain
family TFs
Other
Saccoglossus kowalevskii
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G095239
Zea mays
GRMZM2G095239
N
GRMZM2G163291
Zea mays
GRMZM2G163291
N
MLOC_34636
Hordeum vulgare
MLOC_34636
N
Pavir.Ia01166
Panicum virgatum
Pavir.Ia01166
N
Pavir.Ib04118
Panicum virgatum
Pavir.Ib04118
N
Sb01g013670
Sorghum bicolor
Sb01g013670
N
Sb03g005080
Sorghum bicolor
Sb03g005080
N
Si036471m.g
Setaria italica
Si036471m.g
N
Traes_5BL_692FEF87A
Triticum aestivum
Traes_5BL_692FEF87A
N
Traes_5DL_1C6A8C773
Triticum aestivum
Traes_5DL_1C6A8C773
N
TRIUR3_26840
Triticum urartu
TRIUR3_26840
N