CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene25833-v1.0-hybrid
(
Fragaria vesca
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gene25833-v1.0-hybrid
T228635_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna25833.1-v1.0-hybrid
Homeodomain
260
308
KNKKKKRKKLFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKA
Links
Other
Homeodomain
family TFs
Other
Fragaria vesca
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
13522_YKL038W
Saccharomyces mikatae
13522_YKL038W
I
0.000
A1O1_07807
Capronia coronata
A1O1_07807
N
0.000
ACLA_019170
Aspergillus clavatus
CADACLAG00001733
N
0.000
ACRE_049460
Acremonium chrysogenum
ACRE_049460
I
0.000
fgenesh1_pg.sca_15_chr12_5_0000287
Nectria haematococca
fgenesh1_pg.sca_15_chr12_5_0000287
N
0.000
KNAG_0A07100
Kazachstania naganishii
KNAG_0A07100
I
0.000
NechaG87850
Fusarium solani
NechaG87850
N
0.000
NFIA_009030
Neosartorya fischeri
CADNFIAG00001492
N
0.000
S40288_03639
Stachybotrys chartarum
S40288_03639
N
0.000
TRIVIDRAFT_190368
Trichoderma virens
TRIVIDRAFT_190368
N
0.000
UV8b_5288
Ustilaginoidea virens
UV8b_5288
N
0.000
ZYRO0E05676g
Zygosaccharomyces rouxii
ZYRO0E05676g
I
0.000