CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10014997.g
(
Linum usitatissimum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Lus10014997.g
T228866_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10014997
Homeodomain
8
64
KRKFHRHTQLQINELESVFLECSHPNDTKYNELSKKLGMDIQQVKYWFQNRRTLKKT
Links
Other
Homeodomain
family TFs
Other
Linum usitatissimum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00831s050
Brassica oleracea
Bo00831s050
I
0.648
Bo8g067530
Brassica oleracea
Bo8g067530
I
0.648
Bostr.7128s0399
Boechera stricta
Bostr.7128s0399
I
0.648
Bra016578
Brassica rapa
Bra016578
I
0.648
Bra025938
Brassica rapa
Bra025938
I
0.648
Bra032003
Brassica rapa
Bra032003
I
0.604
Cagra.2175s0023
Capsella grandiflora
Cagra.2175s0023
I
0.648
Carubv10008485m.g
Capsella rubella
Carubv10008485m.g
I
0.648
Gorai.006G047300
Gossypium raimondii
Gorai.006G047300
I
0.660
HDG12
Arabidopsis thaliana
AT1G17920
I
0.648
Lus10038877.g
Linum usitatissimum
Lus10038877.g
I
0.670
PGSC0003DMG400026962
Solanum tuberosum
PGSC0003DMG400026962
I
0.632
SELMODRAFT_450555
Selaginella moellendorffii
SELMODRAFT_450555
I
0.665
SELMODRAFT_450557
Selaginella moellendorffii
SELMODRAFT_450557
I
0.665
Solyc06g072310.2
Solanum lycopersicum
Solyc06g072310.2
I
0.632
TCM_017892
Theobroma cacao
TCM_017892
I
0.631
Thhalv10006969m.g
Eutrema salsugineum
Thhalv10006969m.g
I
0.648