Pavir.J02165 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.J02165 T229322_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02165.1.p Homeodomain 445 499

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007535 Oryza indica BGIOSGA007535 N 0.833
BRADI3G03747 Brachypodium distachyon BRADI3G03747 N 0.807
GRMZM2G033138 Zea mays GRMZM2G033138 N 0.865
GSMUA_Achr8G23890_001 Musa acuminata GSMUA_Achr8G23890_001 N 0.618
LPERR02G03280 Leersia perrieri LPERR02G03280 N 0.833
OB02G13160 Oryza brachyantha OB02G13160 N 0.833
ORGLA02G0034400 Oryza glaberrima ORGLA02G0034400 N 0.833
ORUFI02G03770 Oryza rufipogon ORUFI02G03770 N 0.833
OS02G0147800 Oryza sativa OS02G0147800 N 0.833
Pavir.Ab00383 Panicum virgatum Pavir.Ab00383 N 0.867
Sb04g003450 Sorghum bicolor Sb04g003450 N 0.865
Si019956m.g Setaria italica Si019956m.g N 0.867
Traes_6AS_9762AE81D Triticum aestivum Traes_6AS_9762AE81D N 0.832