CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.2485s0010
(
Salix purpurea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SapurV1A.2485s0010
T229520_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOX6
M02157_2.00
Oryza sativa
DTGATTRVNN
NNBYAATCAH
PBM
Weirauch et al.(2014)
pTH6378
0.704
0.564
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2485s0010.1.p
Homeodomain
73
129
SSRKKRLTQDQVRLLERTFTSNRKLEPELKAQLANQLGVPPRQISIWYQNKRARWKT
Links
Other
Homeodomain
family TFs
Other
Salix purpurea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_00179
Phytophthora parasitica
F443_00179
N