Thhalv10022660m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10022660m.g T229594_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.826 0.717
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.587
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.618 0.457
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.618 0.457
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.618 0.457
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.618 0.457
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022660m Homeodomain 312 360

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004132 Calypte anna Aan_R004132 N 0.000
Afo_R000303 Aptenodytes forsteri Afo_R000303 N 0.000
Brh_R003060 Buceros rhinoceros Brh_R003060 N 0.000
ENSAMEG00000003238 Ailuropoda melanoleuca ENSAMEG00000003238 N 0.000
ENSAPLG00000010735 Anas platyrhynchos ENSAPLG00000010735 N 0.000
ENSCSAG00000017157 Chlorocebus sabaeus ENSCSAG00000017157 N 0.000
ENSFALG00000003060 Ficedula albicollis ENSFALG00000003060 N 0.000
ENSLACG00000002228 Latimeria chalumnae ENSLACG00000002228 N 0.000
ENSLOCG00000012003 Lepisosteus oculatus ENSLOCG00000012003 N 0.000
ENSMMUG00000021780 Macaca mulatta ENSMMUG00000021780 N 0.000
ENSMPUG00000005201 Mustela putorius furo ENSMPUG00000005201 N 0.000
ENSNLEG00000017372 Nomascus leucogenys ENSNLEG00000017372 N 0.000
ENSOANG00000012970 Ornithorhynchus anatinus ENSOANG00000012970 N 0.000
ENSOARG00000016535 Ovis aries ENSOARG00000016535 N 0.000
ENSONIG00000005464 Oreochromis niloticus ENSONIG00000005464 N 0.000
ENSP00000370949 Macaca fascicularis ENSP00000370949 N 0.000
ENSP00000370949-D1 Bos grunniens ENSP00000370949-D1 N 0.000
ENSPANG00000025042 Papio anubis ENSPANG00000025042 N 0.000
ENSPPYG00000014711 Pongo abelii ENSPPYG00000014711 N 0.000
ENSPSIG00000010167 Pelodiscus sinensis ENSPSIG00000010167 N 0.000
ENSSHAG00000002875 Sarcophilus harrisii ENSSHAG00000002875 N 0.000
Gfo_R010405 Geospiza fortis Gfo_R010405 N 0.000
Myotis_brandtii_NFXL1_10022858 Myotis brandtii Myotis_brandtii_NFXL1_10022858 N 0.000
Nfxl1 Rattus norvegicus ENSRNOG00000058588 N 0.000
NFXL1 Pteropus vampyrus ENSPVAG00000011462 N 0.000
NFXL1 Pan troglodytes ENSPTRG00000016035 N 0.000
NFXL1 Sus scrofa ENSSSCG00000008816 N 0.000
NFXL1 Taeniopygia guttata ENSTGUG00000008171 N 0.000
nfxl1 Tetraodon nigroviridis ENSTNIG00000000336 N 0.000
Nfxl1 Mus musculus ENSMUSG00000072889 N 0.000
NFXL1 Monodelphis domestica ENSMODG00000020621 N 0.000
NFXL1 Bos taurus ENSBTAG00000002201 N 0.000
NFXL1 Canis familiaris ENSCAFG00000001913 N 0.000
NFXL1 Callithrix jacchus ENSCJAG00000018893 N 0.000
NFXL1 Cavia porcellus ENSCPOG00000014371 N 0.000
nfxl1 Danio rerio ENSDARG00000070127 N 0.000
NFXL1 Dasypus novemcinctus ENSDNOG00000037969 N 0.000
NFXL1 Equus caballus ENSECAG00000022401 N 0.000
NFXL1 Erinaceus europaeus ENSEEUG00000003714 N 0.000
NFXL1 Felis catus ENSFCAG00000031403 N 0.000
NFXL1 Homo sapiens ENSG00000170448 N 0.000
nfxl1 Gasterosteus aculeatus ENSGACG00000000304 N 0.000
NFXL1 Gallus gallus ENSGALG00000014138 N 0.000
NFXL1 Gorilla gorilla ENSGGOG00000008489 N 0.000
NFXL1 Loxodonta africana ENSLAFG00000014027 N 0.000
NFXL1 Myotis lucifugus ENSMLUG00000008367 N 0.000
NFXL1 Oryctolagus cuniculus ENSOCUG00000008876 N 0.000
Tal_R006254 Tyto alba Tal_R006254 N 0.000