LDEC001243 (Leptinotarsa decemlineata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LDEC001243 T229985_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.683 0.500
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.683 0.500
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.683 0.500
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.639 0.433
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.639 0.433
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.639 0.433
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.639 0.433
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.639 0.433
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.639 0.433
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.639 0.433
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.639 0.433
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.639 0.433
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC001243-PA Homeodomain 95 124

Links

Other Homeodomain family TFs
Other Leptinotarsa decemlineata TFs

1115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011750 Calypte anna Aan_R011750 N 0.000
AEBP2 Tursiops truncatus ENSTTRG00000011776 N 0.000
AEBP2 Otolemur garnettii ENSOGAG00000017202 N 0.000
Aebp2 Mus musculus ENSMUSG00000030232 N 0.000
AEBP2 Ochotona princeps ENSOPRG00000014454 N 0.000
AEBP2 Pan troglodytes ENSPTRG00000004747 N 0.000
AEBP2 Macaca mulatta ENSMMUG00000016243 N 0.000
AEBP2 Myotis lucifugus ENSMLUG00000006293 N 0.000
AEBP2 Pteropus vampyrus ENSPVAG00000008104 N 0.000
Aebp2 Rattus norvegicus ENSRNOG00000008929 N 0.000
AEBP2 Sus scrofa ENSSSCG00000000587 N 0.000
AEBP2 Loxodonta africana ENSLAFG00000020685 N 0.000
AEBP2 Taeniopygia guttata ENSTGUG00000012348 N 0.000
AEBP2 Gorilla gorilla ENSGGOG00000002023 N 0.000
AEBP2 Homo sapiens ENSG00000139154 N 0.000
AEBP2 Felis catus ENSFCAG00000031640 N 0.000
AEBP2 Equus caballus ENSECAG00000012977 N 0.000
AEBP2 Dasypus novemcinctus ENSDNOG00000014519 N 0.000
AEBP2 Cavia porcellus ENSCPOG00000007440 N 0.000
AEBP2 Canis familiaris ENSCAFG00000012441 N 0.000
AEBP2 Bos taurus ENSBTAG00000010818 N 0.000
aebp2.L Xenopus laevis XB-GENE-6251879 N 0.000
Afo_R006263 Aptenodytes forsteri Afo_R006263 N 0.000
Alligator_sinensis_CCG011535.1 Alligator sinensis Alligator_sinensis_CCG011535.1 N 0.000
ENSAMEG00000012706 Ailuropoda melanoleuca ENSAMEG00000012706 N 0.000
ENSAPLG00000008722 Anas platyrhynchos ENSAPLG00000008722 N 0.000
ENSCJAG00000001342 Callithrix jacchus ENSCJAG00000001342 N 0.000
ENSCSAG00000008085 Chlorocebus sabaeus ENSCSAG00000008085 N 0.000
ENSETEG00000006095 Echinops telfairi ENSETEG00000006095 N 0.000
ENSFALG00000001055 Ficedula albicollis ENSFALG00000001055 N 0.000
ENSGALG00000013136 Gallus gallus ENSGALG00000013136 N 0.000
ENSLACG00000010628 Latimeria chalumnae ENSLACG00000010628 N 0.000
ENSLOCG00000015421 Lepisosteus oculatus ENSLOCG00000015421 N 0.000
ENSMEUG00000010574 Macropus eugenii ENSMEUG00000010574 N 0.000
ENSMGAG00000013591 Meleagris gallopavo ENSMGAG00000013591 N 0.000
ENSMODG00000017867 Monodelphis domestica ENSMODG00000017867 N 0.000
ENSMPUG00000011420 Mustela putorius furo ENSMPUG00000011420 N 0.000
ENSNLEG00000004553 Nomascus leucogenys ENSNLEG00000004553 N 0.000
ENSOARG00000020470 Ovis aries ENSOARG00000020470 N 0.000
ENSOCUG00000016677 Oryctolagus cuniculus ENSOCUG00000016677 N 0.000
ENSP00000381840 Macaca fascicularis ENSP00000381840 N 0.000
ENSP00000381840-D1 Bos grunniens ENSP00000381840-D1 N 0.000
ENSPANG00000010276 Papio anubis ENSPANG00000010276 N 0.000
ENSPPYG00000004345 Pongo abelii ENSPPYG00000004345 N 0.000
ENSPSIG00000002184 Pelodiscus sinensis ENSPSIG00000002184 N 0.000
ENSSARG00000010983 Sorex araneus ENSSARG00000010983 N 0.000
ENSSHAG00000018345 Sarcophilus harrisii ENSSHAG00000018345 N 0.000
ENSVPAG00000008562 Vicugna pacos ENSVPAG00000008562 N 0.000
Gfo_R002231 Geospiza fortis Gfo_R002231 N 0.000
Myotis_brandtii_PLEKHA5_10031422 Myotis brandtii Myotis_brandtii_PLEKHA5_10031422 N 0.000
Tal_R009212 Tyto alba Tal_R009212 N 0.000